Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACCO40_RS06145 Genome accession   NZ_CP167793
Coordinates   1208888..1209079 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus spizizenii strain SHT-15     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1203888..1214079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCO40_RS06115 (ACCO40_06115) argF 1204748..1205707 (+) 960 WP_014113353.1 ornithine carbamoyltransferase -
  ACCO40_RS06120 (ACCO40_06120) - 1205793..1205972 (+) 180 WP_003224549.1 YjzC family protein -
  ACCO40_RS06125 (ACCO40_06125) - 1206018..1206203 (-) 186 WP_003224551.1 YjzD family protein -
  ACCO40_RS06130 (ACCO40_06130) - 1206454..1207188 (+) 735 WP_014113354.1 hypothetical protein -
  ACCO40_RS06135 (ACCO40_06135) - 1207272..1207829 (+) 558 WP_372402636.1 hypothetical protein -
  ACCO40_RS06140 (ACCO40_06140) med 1207920..1208873 (+) 954 WP_072566089.1 transcriptional regulator Med Regulator
  ACCO40_RS06145 (ACCO40_06145) comZ 1208888..1209079 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ACCO40_RS06150 (ACCO40_06150) - 1209109..1209336 (-) 228 WP_072183380.1 hypothetical protein -
  ACCO40_RS06155 (ACCO40_06155) fabH 1209502..1210440 (+) 939 WP_014113357.1 beta-ketoacyl-ACP synthase III -
  ACCO40_RS06160 (ACCO40_06160) fabF 1210465..1211706 (+) 1242 WP_014113358.1 beta-ketoacyl-ACP synthase II -
  ACCO40_RS06165 (ACCO40_06165) - 1211782..1212567 (+) 786 WP_326198015.1 DUF2268 domain-containing protein -
  ACCO40_RS06170 (ACCO40_06170) appD 1212755..1213741 (+) 987 WP_061188358.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1039402 ACCO40_RS06145 WP_003224559.1 1208888..1209079(+) (comZ) [Bacillus spizizenii strain SHT-15]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1039402 ACCO40_RS06145 WP_003224559.1 1208888..1209079(+) (comZ) [Bacillus spizizenii strain SHT-15]
ATGCAGCACGAAAAATCACTTGAGTTCTTGCAAATTGCCATGAAATATCTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCGATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment