Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | ACCO40_RS06140 | Genome accession | NZ_CP167793 |
| Coordinates | 1207920..1208873 (+) | Length | 317 a.a. |
| NCBI ID | WP_072566089.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii strain SHT-15 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1202920..1213873
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCO40_RS06115 (ACCO40_06115) | argF | 1204748..1205707 (+) | 960 | WP_014113353.1 | ornithine carbamoyltransferase | - |
| ACCO40_RS06120 (ACCO40_06120) | - | 1205793..1205972 (+) | 180 | WP_003224549.1 | YjzC family protein | - |
| ACCO40_RS06125 (ACCO40_06125) | - | 1206018..1206203 (-) | 186 | WP_003224551.1 | YjzD family protein | - |
| ACCO40_RS06130 (ACCO40_06130) | - | 1206454..1207188 (+) | 735 | WP_014113354.1 | hypothetical protein | - |
| ACCO40_RS06135 (ACCO40_06135) | - | 1207272..1207829 (+) | 558 | WP_372402636.1 | hypothetical protein | - |
| ACCO40_RS06140 (ACCO40_06140) | med | 1207920..1208873 (+) | 954 | WP_072566089.1 | transcriptional regulator Med | Regulator |
| ACCO40_RS06145 (ACCO40_06145) | comZ | 1208888..1209079 (+) | 192 | WP_003224559.1 | ComG operon transcriptional repressor ComZ | Regulator |
| ACCO40_RS06150 (ACCO40_06150) | - | 1209109..1209336 (-) | 228 | WP_072183380.1 | hypothetical protein | - |
| ACCO40_RS06155 (ACCO40_06155) | fabH | 1209502..1210440 (+) | 939 | WP_014113357.1 | beta-ketoacyl-ACP synthase III | - |
| ACCO40_RS06160 (ACCO40_06160) | fabF | 1210465..1211706 (+) | 1242 | WP_014113358.1 | beta-ketoacyl-ACP synthase II | - |
| ACCO40_RS06165 (ACCO40_06165) | - | 1211782..1212567 (+) | 786 | WP_326198015.1 | DUF2268 domain-containing protein | - |
| ACCO40_RS06170 (ACCO40_06170) | appD | 1212755..1213741 (+) | 987 | WP_061188358.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35408.04 Da Isoelectric Point: 4.7208
>NTDB_id=1039401 ACCO40_RS06140 WP_072566089.1 1207920..1208873(+) (med) [Bacillus spizizenii strain SHT-15]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVSEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAARMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPYIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLKTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVSEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAARMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPYIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLKTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=1039401 ACCO40_RS06140 WP_072566089.1 1207920..1208873(+) (med) [Bacillus spizizenii strain SHT-15]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGTTGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCAAAATATAATGTGGATGTCTACTATAAAGAAGGCGTTAAAACAGATGAAGATATTATAAATGCGATTGAGGAT
TTTCATAAGCGGGGCGTTAATCTCCTCTATGGCCATGGGAGTGAATATGCAGAGGTGTTTAACTTGGTCAGTGAAGATTA
TCCAGATATGGAATTCGTCATTTCTAATGCTAAAGCAAAAGCTGATAATGTGACGAGTGTCCATTTCAGCGGCGAAGCAA
TGGGTTTCTTTGGAGGAATGACAGCTGCCCGTATGTCGAAAACGAATCAGGTCGGCGTGATTGCTTCCTTTACGTGGCAG
CCGGAGGTTGACGGTTTTATCAAAGGGGCCAAATATGAAAATCCGTATATAGAAGTAAACACAAAATATACGGATCATTG
GGATGATGATACGACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGATG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTTTATGCCATCGGATACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCTTATGAAATCATCGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGCGATCATTACTACGACCTGAAAACGGGAGTTGTTGAAATGGGAACATTCAGCCCGCTTGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGAACTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGTTGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCAAAATATAATGTGGATGTCTACTATAAAGAAGGCGTTAAAACAGATGAAGATATTATAAATGCGATTGAGGAT
TTTCATAAGCGGGGCGTTAATCTCCTCTATGGCCATGGGAGTGAATATGCAGAGGTGTTTAACTTGGTCAGTGAAGATTA
TCCAGATATGGAATTCGTCATTTCTAATGCTAAAGCAAAAGCTGATAATGTGACGAGTGTCCATTTCAGCGGCGAAGCAA
TGGGTTTCTTTGGAGGAATGACAGCTGCCCGTATGTCGAAAACGAATCAGGTCGGCGTGATTGCTTCCTTTACGTGGCAG
CCGGAGGTTGACGGTTTTATCAAAGGGGCCAAATATGAAAATCCGTATATAGAAGTAAACACAAAATATACGGATCATTG
GGATGATGATACGACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGATG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTTTATGCCATCGGATACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCTTATGAAATCATCGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGCGATCATTACTACGACCTGAAAACGGGAGTTGTTGAAATGGGAACATTCAGCCCGCTTGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGAACTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
98.107 |
100 |
0.981 |