Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACCO40_RS02215 Genome accession   NZ_CP167793
Coordinates   453712..454662 (+) Length   316 a.a.
NCBI ID   WP_061186190.1    Uniprot ID   -
Organism   Bacillus spizizenii strain SHT-15     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 448712..459662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCO40_RS02190 (ACCO40_02190) yclK 448766..450187 (+) 1422 WP_072565741.1 two-component system sensor histidine kinase YclK -
  ACCO40_RS02195 (ACCO40_02195) rapC 450349..451497 (+) 1149 WP_014112649.1 response regulator aspartate phosphatase RapC Regulator
  ACCO40_RS02200 (ACCO40_02200) phrC 451481..451603 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ACCO40_RS02205 (ACCO40_02205) - 451702..451809 (-) 108 WP_061186188.1 YjcZ family sporulation protein -
  ACCO40_RS02210 (ACCO40_02210) - 451962..453326 (-) 1365 WP_072181732.1 aspartate kinase -
  ACCO40_RS02215 (ACCO40_02215) ceuB 453712..454662 (+) 951 WP_061186190.1 petrobactin ABC transporter permease YclN Machinery gene
  ACCO40_RS02220 (ACCO40_02220) yclO 454655..455602 (+) 948 WP_014112652.1 petrobactin ABC transporter permease YclO -
  ACCO40_RS02225 (ACCO40_02225) yclP 455596..456354 (+) 759 WP_014112653.1 petrobactin ABC transporter ATP-binding protein YclP -
  ACCO40_RS02230 (ACCO40_02230) yclQ 456376..457332 (+) 957 WP_087987705.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ACCO40_RS02235 (ACCO40_02235) - 457450..458600 (+) 1151 WP_372401857.1 IS3 family transposase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34916.33 Da        Isoelectric Point: 9.9364

>NTDB_id=1039391 ACCO40_RS02215 WP_061186190.1 453712..454662(+) (ceuB) [Bacillus spizizenii strain SHT-15]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1039391 ACCO40_RS02215 WP_061186190.1 453712..454662(+) (ceuB) [Bacillus spizizenii strain SHT-15]
ATGAAGTTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCTACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCATTGCTGCTGTTCACATCCGCCAGTCCTTTAATGAAAATGCT
GGTCGCGTTCGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTCCAAGGAGACTTCTCTTTAGTGGTAAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTTATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGAGAAAGTTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
TTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTCTCGATTTACAGAGGAGACAATCTGAAGAACAGCCTGCCGCACAC
GGCGCTATTGGGAGCGGTTTTTGTGCTCTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment