Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACDJ02_RS14870 Genome accession   NZ_CP167777
Coordinates   3134324..3136552 (+) Length   742 a.a.
NCBI ID   WP_125269291.1    Uniprot ID   -
Organism   Acinetobacter ursingii strain E5131942     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3129324..3141552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDJ02_RS14845 (ACDJ02_14845) lnt 3129721..3131280 (+) 1560 WP_044434015.1 apolipoprotein N-acyltransferase -
  ACDJ02_RS14850 (ACDJ02_14850) - 3131346..3131684 (-) 339 WP_044434017.1 tRNA-binding protein -
  ACDJ02_RS14855 (ACDJ02_14855) - 3131818..3132156 (-) 339 WP_004994178.1 hypothetical protein -
  ACDJ02_RS14860 (ACDJ02_14860) gspG 3132486..3132938 (-) 453 WP_044434219.1 type II secretion system major pseudopilin GspG -
  ACDJ02_RS14865 (ACDJ02_14865) gspF 3132962..3134167 (-) 1206 WP_151724103.1 type II secretion system inner membrane protein GspF -
  ACDJ02_RS14870 (ACDJ02_14870) priA 3134324..3136552 (+) 2229 WP_125269291.1 primosomal protein N' Machinery gene
  ACDJ02_RS14875 (ACDJ02_14875) - 3136641..3138494 (+) 1854 WP_151724102.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ACDJ02_RS14880 (ACDJ02_14880) - 3138545..3139420 (+) 876 WP_004991565.1 Hsp33 family molecular chaperone HslO -
  ACDJ02_RS14885 (ACDJ02_14885) - 3139591..3140535 (+) 945 WP_151724101.1 DnaJ C-terminal domain-containing protein -
  ACDJ02_RS14890 (ACDJ02_14890) - 3140547..3140876 (+) 330 WP_004991571.1 chaperone modulator CbpM -
  ACDJ02_RS14895 (ACDJ02_14895) - 3140982..3141074 (+) 93 WP_282361312.1 hypothetical protein -
  ACDJ02_RS14900 (ACDJ02_14900) crcB 3141085..3141465 (-) 381 WP_372375460.1 fluoride efflux transporter CrcB -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84667.96 Da        Isoelectric Point: 8.5579

>NTDB_id=1039328 ACDJ02_RS14870 WP_125269291.1 3134324..3136552(+) (priA) [Acinetobacter ursingii strain E5131942]
MPNTPPPQTEIYRIRVAVPVYLYETFDYSLTQAQYQQAQVGARVAIPFGRQKLIGIITEKIAPDVPLDSRFQLKAIFELL
DDDAILDDKVLTLLTWSAQYYQFPIGEVMQAALPALLRQGKPLDILAHIWKIKPCEDAESKLKRSQKQFEAYQILKLHPT
GTTENILNLSGVETATLRALAKKDLVECHLETQDFRPTPVQLAQMPLTPNDDQKKAIQHVVQSLHHYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFHCDVALMHSGLNDSKRLQAWQQAKMGKASIILGTRSAIYTP
LHNLGLIILDEEHDISYKQQEGFRYHARDVALYRGHLENCPVILGSATPSIDSYHLVEQEKLKLLQLNQRAGVALMPKMH
VIDLKVAKKKQGLSQQLIEQIQKKLDKKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYTYLHCHHCGTI
QRLPDQCPECQHQSLKTLGMGTGKVEEHLNELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNQPMILLGTQMLAKGHHFP
YVTLVAILDIDAGLLSVDVRAPERTAQLIVQVSGRAGRGEHKGDVYLQTLRPDHPMLITLIEKDYRAVAKHMLHERKAAL
LPPYRYAVLIRSDSKNRDYSQQFLADIAAQLQLMAQDSIEIWGPIPAPMERKAGRYRAHMVILSQDRARMHFFLRQWWAQ
VVHLPKQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=1039328 ACDJ02_RS14870 WP_125269291.1 3134324..3136552(+) (priA) [Acinetobacter ursingii strain E5131942]
ATGCCAAACACGCCGCCACCTCAAACAGAGATTTACCGTATTCGGGTCGCTGTACCTGTCTATCTGTATGAGACCTTTGA
TTACAGCTTAACTCAGGCTCAATATCAACAGGCTCAGGTTGGCGCGCGCGTGGCAATTCCTTTTGGTCGGCAAAAATTGA
TTGGCATCATTACTGAGAAAATCGCGCCAGATGTTCCACTGGATTCACGGTTTCAGCTCAAAGCTATTTTTGAGTTGCTT
GATGATGATGCCATTTTAGATGACAAAGTTTTAACTTTGTTGACATGGTCAGCACAGTATTATCAGTTTCCGATTGGGGA
GGTGATGCAAGCGGCTTTGCCTGCACTGTTACGACAAGGCAAACCATTGGATATTTTGGCGCATATCTGGAAAATCAAAC
CTTGTGAAGATGCAGAATCCAAACTTAAACGCTCGCAAAAGCAATTTGAAGCCTATCAAATTTTAAAATTACACCCAACT
GGAACGACCGAAAATATTTTAAATTTAAGTGGAGTAGAAACTGCGACTTTACGCGCTTTGGCAAAAAAGGATCTGGTCGA
ATGTCATTTAGAAACACAAGATTTTCGACCGACACCCGTTCAATTGGCACAAATGCCCCTCACGCCCAACGACGATCAGA
AAAAAGCCATTCAACACGTGGTTCAGTCGCTCCATCATTATCAAGCTTTTTTACTGGACGGCTTAACAGGCAGTGGCAAA
ACCGAAGTCTATCTACACATCATGCATGAGGTGTTGAAACAAGGTAAGCAAGTGTTGGTTTTAGTGCCTGAAATCGGACT
AACTCCGCAAACCATTTCCCGATTTAAATCACGTTTTCATTGTGATGTTGCGCTGATGCATTCGGGCTTAAACGACTCCA
AACGTCTGCAAGCATGGCAACAGGCCAAAATGGGCAAAGCTTCAATCATTTTAGGCACACGCTCTGCTATTTATACGCCT
TTGCATAATCTTGGTTTAATCATTCTGGATGAAGAACACGATATTTCCTATAAACAACAGGAAGGCTTTCGTTATCATGC
ACGGGATGTGGCGCTGTATCGAGGGCATTTAGAAAACTGCCCTGTTATTTTAGGCTCAGCTACACCAAGTATTGATAGTT
ACCATCTGGTCGAACAGGAAAAATTAAAACTGCTACAACTCAATCAACGTGCGGGTGTGGCACTCATGCCGAAAATGCAT
GTGATTGATTTAAAGGTTGCCAAGAAAAAGCAAGGATTGAGTCAACAACTGATTGAGCAAATCCAAAAAAAACTGGATAA
AAAAGAACAAGTGCTCATTTTTCTGAATCGCCGGGGTTATGCACCTGTTTTGGTTTGCGAAAGCTGTGGCTGGCAAGCCA
ATTGTCCACATTGTGATGCGCATTTTACGCTGCATACTCAACCTTACACTTATCTGCATTGTCACCATTGCGGTACGATT
CAGCGCTTACCCGATCAATGTCCAGAGTGTCAGCATCAGAGCCTAAAGACTCTCGGAATGGGAACAGGTAAAGTTGAAGA
ACATTTGAATGAACTTTTTCCAGATCATGATGTGATTCGGGTCGACCGCGACAGCACCAGTCGGGTCGGAAGCTGGCAGA
AAATTTATGATCGGATTCAGCAAAATCAACCCATGATCTTGCTAGGCACACAAATGCTCGCCAAAGGTCATCATTTTCCT
TATGTCACCTTGGTTGCGATTTTAGATATTGATGCAGGTTTACTGTCTGTCGATGTCCGTGCACCTGAACGTACTGCACA
ATTGATTGTACAAGTGTCTGGTCGCGCTGGACGTGGGGAACATAAAGGTGACGTTTATTTACAGACGTTGAGACCTGATC
ATCCCATGCTCATCACGCTGATCGAAAAAGATTATCGTGCTGTCGCCAAACATATGCTCCATGAGCGTAAAGCTGCATTA
TTGCCCCCTTATCGTTATGCGGTATTGATTCGTTCAGATTCTAAAAACCGTGACTATAGTCAGCAATTCTTAGCCGACAT
CGCTGCCCAATTACAGTTAATGGCGCAGGATAGCATTGAGATTTGGGGACCTATTCCCGCGCCGATGGAACGCAAAGCTG
GACGCTATCGGGCGCATATGGTGATCTTGTCGCAAGATCGCGCACGTATGCACTTCTTTTTACGGCAATGGTGGGCGCAA
GTGGTACATTTACCCAAACAGCATCAATTACGTTTATCAATTGATGTTGATCCACAGGAATTTAACTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

81.132

100

0.811

Multiple sequence alignment