Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACDJ02_RS10085 | Genome accession | NZ_CP167777 |
| Coordinates | 2096600..2096953 (-) | Length | 117 a.a. |
| NCBI ID | WP_252511492.1 | Uniprot ID | - |
| Organism | Acinetobacter ursingii strain E5131942 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2091600..2101953
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDJ02_RS10060 (ACDJ02_10060) | - | 2092048..2093172 (-) | 1125 | WP_004989425.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACDJ02_RS10065 (ACDJ02_10065) | ung | 2093169..2093882 (-) | 714 | WP_004997171.1 | uracil-DNA glycosylase | - |
| ACDJ02_RS10070 (ACDJ02_10070) | - | 2093930..2094526 (-) | 597 | WP_151831624.1 | 6-carboxytetrahydropterin synthase | - |
| ACDJ02_RS10075 (ACDJ02_10075) | gspK | 2094688..2095653 (-) | 966 | WP_151788591.1 | type II secretion system minor pseudopilin GspK | - |
| ACDJ02_RS10080 (ACDJ02_10080) | xcpW | 2095659..2096336 (-) | 678 | WP_151724345.1 | GspJ family type II secretion system protein | Machinery gene |
| ACDJ02_RS10085 (ACDJ02_10085) | xcpV | 2096600..2096953 (-) | 354 | WP_252511492.1 | type II secretion system protein GspI | Machinery gene |
| ACDJ02_RS10090 (ACDJ02_10090) | - | 2097570..2098070 (-) | 501 | WP_252511491.1 | type II secretion system protein GspH | - |
| ACDJ02_RS10095 (ACDJ02_10095) | - | 2098318..2098926 (-) | 609 | WP_004989445.1 | TetR/AcrR family transcriptional regulator | - |
| ACDJ02_RS10100 (ACDJ02_10100) | - | 2098970..2099743 (-) | 774 | WP_151788592.1 | TatD family hydrolase | - |
| ACDJ02_RS10105 (ACDJ02_10105) | - | 2099760..2100101 (-) | 342 | WP_004989449.1 | PilZ domain-containing protein | - |
| ACDJ02_RS10110 (ACDJ02_10110) | - | 2100114..2101082 (-) | 969 | WP_004989450.1 | DNA polymerase III subunit delta' | - |
| ACDJ02_RS10115 (ACDJ02_10115) | kdsB | 2101097..2101858 (-) | 762 | WP_004989453.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 117 a.a. Molecular weight: 13025.87 Da Isoelectric Point: 8.5184
>NTDB_id=1039321 ACDJ02_RS10085 WP_252511492.1 2096600..2096953(-) (xcpV) [Acinetobacter ursingii strain E5131942]
MVALAIFAIAAVAVTKVGMQYTQSTANAILRTKAQFVAMNEAAQMEINKQWLIGTESKQITSQGETWQIDKRSESTISPN
VQRVEIQVSLFNNEQGKVESGITNIVFFNYPQQVKTQ
MVALAIFAIAAVAVTKVGMQYTQSTANAILRTKAQFVAMNEAAQMEINKQWLIGTESKQITSQGETWQIDKRSESTISPN
VQRVEIQVSLFNNEQGKVESGITNIVFFNYPQQVKTQ
Nucleotide
Download Length: 354 bp
>NTDB_id=1039321 ACDJ02_RS10085 WP_252511492.1 2096600..2096953(-) (xcpV) [Acinetobacter ursingii strain E5131942]
ATGGTGGCTTTGGCTATTTTTGCAATTGCAGCTGTTGCCGTGACAAAGGTGGGTATGCAATACACTCAGTCCACTGCAAA
TGCCATTTTAAGAACCAAAGCCCAGTTTGTTGCCATGAATGAGGCGGCTCAAATGGAAATTAATAAACAATGGCTGATAG
GAACTGAATCTAAGCAAATTACCTCTCAGGGTGAAACTTGGCAAATTGATAAGCGCTCTGAATCGACCATCAGTCCTAAT
GTGCAGCGGGTTGAGATACAAGTCAGTTTATTTAATAATGAACAAGGTAAGGTCGAATCTGGCATTACCAATATTGTGTT
TTTTAATTATCCTCAACAAGTTAAAACGCAATGA
ATGGTGGCTTTGGCTATTTTTGCAATTGCAGCTGTTGCCGTGACAAAGGTGGGTATGCAATACACTCAGTCCACTGCAAA
TGCCATTTTAAGAACCAAAGCCCAGTTTGTTGCCATGAATGAGGCGGCTCAAATGGAAATTAATAAACAATGGCTGATAG
GAACTGAATCTAAGCAAATTACCTCTCAGGGTGAAACTTGGCAAATTGATAAGCGCTCTGAATCGACCATCAGTCCTAAT
GTGCAGCGGGTTGAGATACAAGTCAGTTTATTTAATAATGAACAAGGTAAGGTCGAATCTGGCATTACCAATATTGTGTT
TTTTAATTATCCTCAACAAGTTAAAACGCAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
73.913 |
98.291 |
0.726 |