Detailed information NTG1039317

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: ACDJ02_RS06800
• Genome accession: NZ_CP167777
• Coordinates: 1412217..1412783 (+)
• Length: 188 a.a.
• NCBI ID: WP_151725254.1
• Uniprot ID: -
• Organism: Acinetobacter ursingii strain E5131942
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1407217..1417783

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDJ02_RS06775 (ACDJ02_06775)	-	1407588..1407764 (-)	177	WP_004988673.1	hypothetical protein	-
ACDJ02_RS06780 (ACDJ02_06780)	mutS	1407922..1410561 (-)	2640	WP_151725256.1	DNA mismatch repair protein MutS	-
ACDJ02_RS06785 (ACDJ02_06785)	-	1411002..1411229 (+)	228	WP_004988669.1	hypothetical protein	-
ACDJ02_RS06790 (ACDJ02_06790)	-	1411239..1411748 (+)	510	WP_004988665.1	Tfp pilus assembly protein FimT/FimU	-
ACDJ02_RS06795 (ACDJ02_06795)	-	1411754..1412212 (+)	459	WP_371863737.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ACDJ02_RS06800 (ACDJ02_06800)	comE	1412217..1412783 (+)	567	WP_151725254.1	type IV pilin protein	Machinery gene
ACDJ02_RS06805 (ACDJ02_06805)	pilE	1412777..1413232 (+)	456	WP_119686646.1	type IV pilin protein	Machinery gene
ACDJ02_RS06810 (ACDJ02_06810)	-	1413636..1413923 (+)	288	WP_151788747.1	hypothetical protein	-
ACDJ02_RS06815 (ACDJ02_06815)	-	1413981..1414580 (+)	600	WP_151788748.1	hypothetical protein	-
ACDJ02_RS06820 (ACDJ02_06820)	-	1414827..1416263 (+)	1437	WP_372376330.1	AAA family ATPase	-
ACDJ02_RS06825 (ACDJ02_06825)	-	1416254..1417176 (-)	923	Protein_1319	IS30 family transposase	-

Sequence

Protein

• Length: 188 a.a.
• Molecular weight: 21122.73 Da
• Isoelectric Point: 6.4839

>NTDB_id=1039317 ACDJ02_RS06800 WP_151725254.1 1412217..1412783(+) (comE) [Acinetobacter ursingii strain E5131942]
MKKETRKIRSHYGYGFTLIELMVTVAIVAIFAAIAFPSYQAYTRKAYAAQTQQEIQKLAEQLERHKARNFTYKGFDASFL
YKDASGVVVSNFYEKKQELSFPVDGSSKKYTLFIVDNSPKDEDEDEEKDEEKGLLTSSTSLGQGWAIKALSTDDENDSFL
KTSNGIQCKNKTKANITFSGCGVGSEIW

Nucleotide

• Length: 567 bp

>NTDB_id=1039317 ACDJ02_RS06800 WP_151725254.1 1412217..1412783(+) (comE) [Acinetobacter ursingii strain E5131942]
ATGAAAAAAGAAACTAGGAAAATACGCTCTCACTACGGCTATGGTTTTACTTTAATTGAGCTGATGGTAACAGTTGCAAT
TGTCGCGATTTTTGCTGCAATTGCATTCCCAAGTTATCAAGCTTATACAAGAAAAGCTTATGCTGCACAGACTCAACAGG
AAATTCAAAAACTGGCTGAGCAATTAGAACGACATAAAGCCCGTAACTTCACTTACAAAGGCTTTGATGCAAGTTTTTTG
TACAAAGATGCAAGTGGGGTTGTGGTTTCAAATTTTTATGAAAAAAAACAAGAACTTAGTTTTCCAGTAGATGGCTCTTC
TAAGAAATACACACTTTTTATTGTAGATAATTCTCCTAAAGATGAAGATGAAGATGAAGAGAAAGACGAAGAGAAAGGTC
TGTTGACTAGCTCAACATCTTTGGGGCAGGGCTGGGCAATTAAGGCATTAAGCACTGATGATGAGAATGATAGTTTTTTA
AAAACTAGCAACGGTATTCAATGTAAAAATAAAACCAAAGCAAATATCACTTTTTCGGGATGTGGGGTGGGGAGCGAGAT
ATGGTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (15-36)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (37-112)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Acinetobacter baylyi ADP1	55.056	94.681	0.521