Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   ACDJ02_RS01855 Genome accession   NZ_CP167777
Coordinates   389093..390244 (-) Length   383 a.a.
NCBI ID   WP_005001713.1    Uniprot ID   A0A3F3L989
Organism   Acinetobacter ursingii strain E5131942     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 384093..395244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDJ02_RS01835 (ACDJ02_01835) - 384809..385915 (+) 1107 WP_004985584.1 ABC transporter permease -
  ACDJ02_RS01840 (ACDJ02_01840) - 385925..386842 (+) 918 WP_005001710.1 ABC transporter permease -
  ACDJ02_RS01845 (ACDJ02_01845) - 387336..387908 (-) 573 WP_151725292.1 L-threonylcarbamoyladenylate synthase -
  ACDJ02_RS01850 (ACDJ02_01850) dprA 387951..389081 (-) 1131 WP_151725291.1 DNA-processing protein DprA Machinery gene
  ACDJ02_RS01855 (ACDJ02_01855) tsaP 389093..390244 (-) 1152 WP_005001713.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACDJ02_RS01860 (ACDJ02_01860) def 390366..390890 (+) 525 WP_004985572.1 peptide deformylase -
  ACDJ02_RS01865 (ACDJ02_01865) - 390976..391407 (+) 432 WP_371863712.1 DUF2946 family protein -
  ACDJ02_RS01870 (ACDJ02_01870) - 391508..393550 (+) 2043 WP_151833884.1 TonB-dependent copper receptor -
  ACDJ02_RS01875 (ACDJ02_01875) - 393594..393851 (+) 258 WP_004985566.1 hypothetical protein -
  ACDJ02_RS01880 (ACDJ02_01880) - 393897..395102 (-) 1206 WP_151833883.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 42196.38 Da        Isoelectric Point: 9.1290

>NTDB_id=1039294 ACDJ02_RS01855 WP_005001713.1 389093..390244(-) (tsaP) [Acinetobacter ursingii strain E5131942]
MKKVLHGIRSFNALGLKKHCIAVAICAGLGMTGLSATYAASPNVNPPSLRASAPNVYVVKKGDTLWDISGKFLDKPWRWP
EIWASNKHVKNPHWIYPGDRLLLCTLDGRPLVGRDEGDGCEGIIRRYSGRTTLQPQVRIEQLSNTIPVIPLDNIKQWLDR
TAIVASDSIENTPYILGTADQRVLAGKGQNVYVRGQGLTSGQRYAVYRKGEPYVLTDANGKKHTVGLELLQVASGIVTQV
DHDIATMELTDSYNAEVRRGDLVMFEQEAMLPTLFYPTEANQVTQGGQIVRVMGSIGSAAKNSVVTIDRGRLDGVQSGHV
FAIYQQGETVQDPKTKERIKLPNQKVGTLMVFRTFDQLSYAYVLESSLPIKVGAEILPPRLDD

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1039294 ACDJ02_RS01855 WP_005001713.1 389093..390244(-) (tsaP) [Acinetobacter ursingii strain E5131942]
ATGAAAAAGGTTTTGCACGGCATTCGATCATTTAATGCCTTGGGGTTGAAAAAACATTGTATCGCTGTGGCGATTTGCGC
TGGACTCGGGATGACGGGACTCAGTGCAACCTATGCAGCAAGTCCAAACGTGAATCCACCTTCACTCAGAGCAAGCGCAC
CAAATGTTTATGTCGTTAAAAAAGGCGATACATTGTGGGATATTTCAGGAAAATTTCTGGATAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAGCAATAAACATGTTAAAAATCCGCACTGGATTTATCCGGGTGATCGTTTGTTGTTATGTACGCTAGA
TGGACGTCCACTGGTAGGCCGTGACGAAGGTGATGGTTGTGAAGGTATTATCCGTCGTTATTCGGGACGAACCACGCTAC
AGCCTCAAGTTCGTATTGAACAACTCAGCAATACGATTCCTGTGATTCCACTGGACAATATCAAACAATGGTTAGATCGT
ACCGCCATTGTCGCGAGTGACAGTATCGAAAATACGCCTTATATTTTAGGGACAGCAGATCAGCGTGTACTGGCAGGTAA
AGGGCAAAATGTTTATGTACGTGGTCAGGGCCTAACTTCGGGTCAACGCTATGCGGTCTATCGTAAAGGCGAACCTTATG
TGCTGACAGATGCAAATGGCAAAAAACACACCGTGGGCTTGGAATTACTACAAGTCGCTTCAGGTATTGTGACTCAAGTC
GACCATGATATTGCCACCATGGAATTGACCGATAGCTATAATGCCGAAGTTCGTCGTGGTGATCTGGTCATGTTTGAACA
AGAAGCCATGTTACCAACTTTGTTCTATCCAACAGAAGCCAATCAGGTAACTCAAGGTGGACAAATCGTTCGGGTAATGG
GTTCAATCGGTTCTGCTGCTAAAAATAGTGTAGTCACCATTGATCGTGGTCGTCTGGATGGCGTGCAATCAGGTCATGTT
TTTGCAATTTATCAACAAGGTGAAACTGTTCAGGACCCTAAAACCAAAGAAAGAATCAAATTGCCAAATCAAAAAGTCGG
TACCTTGATGGTATTTAGAACTTTTGACCAACTAAGCTATGCCTATGTGTTAGAGAGTTCTTTACCGATTAAAGTGGGTG
CTGAGATTTTACCTCCCCGTCTTGACGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3F3L989

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

70.573

100

0.708


Multiple sequence alignment