Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ACCK13_RS04740 Genome accession   NZ_CP167764
Coordinates   963582..964568 (+) Length   328 a.a.
NCBI ID   WP_094970879.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CUBIST-10     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 958582..969568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCK13_RS04715 (ACCK13_04715) opp4B 958796..959758 (+) 963 WP_000915997.1 oligopeptide ABC transporter permease -
  ACCK13_RS04720 (ACCK13_04720) opp4C 959770..960651 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  ACCK13_RS04725 (ACCK13_04725) trpS 960693..961682 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  ACCK13_RS04730 (ACCK13_04730) spxA 961976..962371 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACCK13_RS04735 (ACCK13_04735) mecA 962742..963461 (+) 720 WP_001217728.1 adaptor protein MecA -
  ACCK13_RS04740 (ACCK13_04740) coiA 963582..964568 (+) 987 WP_094970879.1 competence protein CoiA Machinery gene
  ACCK13_RS04745 (ACCK13_04745) pepF 964616..966424 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  ACCK13_RS04750 (ACCK13_04750) yjbH 966884..967690 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  ACCK13_RS04755 (ACCK13_04755) - 967713..968078 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  ACCK13_RS04760 (ACCK13_04760) - 968182..968775 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  ACCK13_RS04765 (ACCK13_04765) - 968961..969308 (+) 348 WP_001242103.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38894.59 Da        Isoelectric Point: 9.5714

>NTDB_id=1039176 ACCK13_RS04740 WP_094970879.1 963582..964568(+) (coiA) [Staphylococcus aureus strain CUBIST-10]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEALCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1039176 ACCK13_RS04740 WP_094970879.1 963582..964568(+) (coiA) [Staphylococcus aureus strain CUBIST-10]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCTTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

99.695

100

0.997
  coiA Staphylococcus aureus MW2

97.256

100

0.973

Multiple sequence alignment