Detailed information NTG1038706

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACBZ91_RS14270
• Genome accession: NZ_CP167179
• Coordinates: 3037465..3038472 (-)
• Length: 335 a.a.
• NCBI ID: WP_014230660.1
• Uniprot ID: -
• Organism: Vibrio natriegens strain JSH01
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3032465..3043472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACBZ91_RS14240 (ACBZ91_14240)	zapB	3032591..3032833 (+)	243	WP_014230654.1	cell division protein ZapB	-
ACBZ91_RS14245 (ACBZ91_14245)	rraA	3032907..3033449 (-)	543	WP_014230655.1	ribonuclease E activity regulator RraA	-
ACBZ91_RS14250 (ACBZ91_14250)	-	3033526..3034443 (-)	918	WP_014230656.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACBZ91_RS14255 (ACBZ91_14255)	hslU	3034698..3036029 (-)	1332	WP_014230657.1	HslU--HslV peptidase ATPase subunit	-
ACBZ91_RS14260 (ACBZ91_14260)	hslV	3036053..3036604 (-)	552	WP_020335799.1	ATP-dependent protease subunit HslV	-
ACBZ91_RS14265 (ACBZ91_14265)	-	3036759..3037303 (-)	545	Protein_2705	SPOR domain-containing protein	-
ACBZ91_RS14270 (ACBZ91_14270)	cytR	3037465..3038472 (-)	1008	WP_014230660.1	DNA-binding transcriptional regulator CytR	Regulator
ACBZ91_RS14275 (ACBZ91_14275)	priA	3038808..3041012 (-)	2205	WP_372377743.1	primosomal protein N'	-
ACBZ91_RS14280 (ACBZ91_14280)	rpmE	3041310..3041531 (+)	222	WP_014230662.1	50S ribosomal protein L31	-
ACBZ91_RS14285 (ACBZ91_14285)	rpsJ	3041990..3042301 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACBZ91_RS14290 (ACBZ91_14290)	rplC	3042316..3042945 (+)	630	WP_372377749.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.30 Da
• Isoelectric Point: 6.2447

>NTDB_id=1038706 ACBZ91_RS14270 WP_014230660.1 3037465..3038472(-) (cytR) [Vibrio natriegens strain JSH01]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGINKDPQYSIVTEFSFDGGAKAVRKLLELAEPPTA
IFCHCDTMAIGAIQEAKKLGFRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TNLIVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=1038706 ACBZ91_RS14270 WP_014230660.1 3037465..3038472(-) (cytR) [Vibrio natriegens strain JSH01]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCTACCGCGACGGTATCTCGAGCATTAATGAATCCGGAGAA
AGTCTCCTCTTCAACCAGAAAAAGAGTTGAAGACGCGGTACTCGAAGCAGGTTACTCACCAAATTCATTAGCGCGTAATT
TACGACGAAACGAATCGAAAACCATTGTTACGATCGTTCCTGACATCTGCGACCCTTACTTTTCCGAAATCATCCGTGGT
ATCGAAGATGCGGCCATGGAGCACGGCTACCTGGTTTTGCTGGGAGACAGTGGCCAGCAGAAGAAACGCGAAAGCTCTTT
CGTAAACTTGGTATTTACAAAGCAAGCGGACGGGATGCTGCTACTTGGTACTGACTTGCCGTTTGATGTGAGTAAGCCAG
AGCAGAAAAACCTGCCACCAATGGTCATGGCGTGTGAATTTGCGCCTGAGCTGGAACTGCCAACCGTTCATATCGATAAC
CTGACTTCTGCCTTTGAAGCGGTCAATTATCTGACTCAGCTTGGCCACAAACGTATTGCGCAAATTTCAGGTCCTGATAC
CGCGGTATTGTGCCAATTCCGTCAACAAGGCTACCAGCAAGCACTGCGTCGTGCAGGGATCAATAAAGACCCGCAATACA
GCATTGTCACCGAGTTCTCTTTTGACGGCGGTGCAAAAGCAGTGCGTAAGCTGCTGGAACTAGCAGAACCACCAACCGCG
ATTTTCTGTCACTGTGACACGATGGCAATCGGCGCCATTCAAGAAGCGAAAAAACTCGGCTTCCGTGTACCACAAGATCT
ATCGGTCGTAGGTTTTGATGACATCAATTTCGCGCAGTACTGTGATCCACCGTTAACGACGATCTCCCAGCCTCGCTACG
AGATTGGCCGACAAGCGATGCTAATGATGTTAGAGCTTTTAAAGGGCCACGATGTACATTCTGGATCTCGTCTTCTGGAG
ACTAACCTGATTGTGCGCGGAAGTGCGGCACCTCCTCAGCGAGCGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	97.612	100	0.976
cytR	Vibrio cholerae C6706	89.222	99.701	0.89