Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACB088_RS07745 | Genome accession | NZ_CP167121 |
| Coordinates | 1659048..1659428 (-) | Length | 126 a.a. |
| NCBI ID | WP_375038536.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. RW6 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1654048..1664428
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACB088_RS07715 (ACB088_07715) | tadA | 1654170..1654673 (-) | 504 | WP_004642637.1 | tRNA adenosine(34) deaminase TadA | - |
| ACB088_RS07720 (ACB088_07720) | - | 1654679..1655803 (-) | 1125 | WP_080026950.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACB088_RS07725 (ACB088_07725) | ung | 1655800..1656513 (-) | 714 | WP_005041081.1 | uracil-DNA glycosylase | - |
| ACB088_RS07730 (ACB088_07730) | - | 1656563..1657159 (-) | 597 | WP_003651480.1 | 6-carboxytetrahydropterin synthase | - |
| ACB088_RS07735 (ACB088_07735) | gspK | 1657388..1658347 (-) | 960 | WP_375038534.1 | type II secretion system minor pseudopilin GspK | - |
| ACB088_RS07740 (ACB088_07740) | xcpW | 1658347..1659048 (-) | 702 | WP_375038535.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACB088_RS07745 (ACB088_07745) | xcpV | 1659048..1659428 (-) | 381 | WP_375038536.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACB088_RS07750 (ACB088_07750) | - | 1659418..1659972 (-) | 555 | WP_309950561.1 | type II secretion system protein | - |
| ACB088_RS07755 (ACB088_07755) | - | 1659982..1660590 (-) | 609 | WP_004642629.1 | TetR/AcrR family transcriptional regulator | - |
| ACB088_RS07760 (ACB088_07760) | - | 1660627..1661400 (-) | 774 | WP_375038538.1 | TatD family hydrolase | - |
| ACB088_RS07765 (ACB088_07765) | - | 1661418..1661759 (-) | 342 | WP_003651467.1 | PilZ domain-containing protein | - |
| ACB088_RS07770 (ACB088_07770) | - | 1661770..1662750 (-) | 981 | WP_307010039.1 | DNA polymerase III subunit delta' | - |
| ACB088_RS07775 (ACB088_07775) | kdsB | 1662764..1663525 (-) | 762 | WP_375038539.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13944.11 Da Isoelectric Point: 9.4463
>NTDB_id=1038281 ACB088_RS07745 WP_375038536.1 1659048..1659428(-) (xcpV) [Acinetobacter sp. RW6]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFLAMNEVALMEINQEWLQGTQSKQVTSQGETWQI
DKSAESTVSPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPIKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFLAMNEVALMEINQEWLQGTQSKQVTSQGETWQI
DKSAESTVSPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPIKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1038281 ACB088_RS07745 WP_375038536.1 1659048..1659428(-) (xcpV) [Acinetobacter sp. RW6]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTAGCTTTAGCAATTTTTGCGGTAGCTGCTGTCGCGTTAACTAA
AGTGGCCATGCAATATACCCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTCTGGCAATGAATGAAGTAG
CCTTAATGGAGATAAATCAAGAATGGCTTCAAGGCACTCAAAGTAAGCAGGTTACTTCTCAAGGGGAAACTTGGCAGATT
GATAAATCAGCTGAATCTACAGTCAGCCCTAATGTTCAGAAAGTAGATTTGCAAATTAGCTTATATGATTCTGATAAAGG
AAAAGTTCAAAATGGTATTACCCACTTGGTATTTTTTAATTATCCAATAAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTAGCTTTAGCAATTTTTGCGGTAGCTGCTGTCGCGTTAACTAA
AGTGGCCATGCAATATACCCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTCTGGCAATGAATGAAGTAG
CCTTAATGGAGATAAATCAAGAATGGCTTCAAGGCACTCAAAGTAAGCAGGTTACTTCTCAAGGGGAAACTTGGCAGATT
GATAAATCAGCTGAATCTACAGTCAGCCCTAATGTTCAGAAAGTAGATTTGCAAATTAGCTTATATGATTCTGATAAAGG
AAAAGTTCAAAATGGTATTACCCACTTGGTATTTTTTAATTATCCAATAAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
92.857 |
100 |
0.929 |