Detailed information NTG1038280

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACB088_RS07740
• Genome accession: NZ_CP167121
• Coordinates: 1658347..1659048 (-)
• Length: 233 a.a.
• NCBI ID: WP_375038535.1
• Uniprot ID: -
• Organism: Acinetobacter sp. RW6
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1653347..1664048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB088_RS07710 (ACB088_07710)	-	1653659..1654099 (-)	441	WP_375038533.1	SRPBCC family protein	-
ACB088_RS07715 (ACB088_07715)	tadA	1654170..1654673 (-)	504	WP_004642637.1	tRNA adenosine(34) deaminase TadA	-
ACB088_RS07720 (ACB088_07720)	-	1654679..1655803 (-)	1125	WP_080026950.1	enoyl-CoA hydratase/isomerase family protein	-
ACB088_RS07725 (ACB088_07725)	ung	1655800..1656513 (-)	714	WP_005041081.1	uracil-DNA glycosylase	-
ACB088_RS07730 (ACB088_07730)	-	1656563..1657159 (-)	597	WP_003651480.1	6-carboxytetrahydropterin synthase	-
ACB088_RS07735 (ACB088_07735)	gspK	1657388..1658347 (-)	960	WP_375038534.1	type II secretion system minor pseudopilin GspK	-
ACB088_RS07740 (ACB088_07740)	xcpW	1658347..1659048 (-)	702	WP_375038535.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACB088_RS07745 (ACB088_07745)	xcpV	1659048..1659428 (-)	381	WP_375038536.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACB088_RS07750 (ACB088_07750)	-	1659418..1659972 (-)	555	WP_309950561.1	type II secretion system protein	-
ACB088_RS07755 (ACB088_07755)	-	1659982..1660590 (-)	609	WP_004642629.1	TetR/AcrR family transcriptional regulator	-
ACB088_RS07760 (ACB088_07760)	-	1660627..1661400 (-)	774	WP_375038538.1	TatD family hydrolase	-
ACB088_RS07765 (ACB088_07765)	-	1661418..1661759 (-)	342	WP_003651467.1	PilZ domain-containing protein	-
ACB088_RS07770 (ACB088_07770)	-	1661770..1662750 (-)	981	WP_307010039.1	DNA polymerase III subunit delta'	-
ACB088_RS07775 (ACB088_07775)	kdsB	1662764..1663525 (-)	762	WP_375038539.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26678.66 Da
• Isoelectric Point: 9.9775

>NTDB_id=1038280 ACB088_RS07740 WP_375038535.1 1658347..1659048(-) (xcpW) [Acinetobacter sp. RW6]
MIKNKYFRSRSTASRLAARSNRARLTRASGFTLVELLVAIAIFTVLSLLGWKIFDYLLKVRDRNAQHEVQLFELQDAYQQ
VLRDTLQIIPLSANQGGQLHPALELDNQVLHFSKAGVTDPLKQGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNKEQPLS
STLLNQVEQFQIMVLTPQEVTKWPEINLDPTKPEEFRKLPKGIKIQLTVAGVSYEWIYSLNQGNLSLSKEGGA

Nucleotide

• Length: 702 bp

>NTDB_id=1038280 ACB088_RS07740 WP_375038535.1 1658347..1659048(-) (xcpW) [Acinetobacter sp. RW6]
ATGATAAAAAATAAATATTTTCGCTCTCGAAGCACAGCTTCACGTCTTGCAGCACGATCGAACAGGGCTCGATTAACTCG
TGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTCGCAATTGCAATTTTTACTGTTTTATCTTTGTTAGGTTGGAAAATTT
TTGATTATTTATTAAAAGTCCGTGATCGTAATGCTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCGTATCAACAA
GTTTTGCGAGATACATTACAAATTATACCCTTATCGGCAAATCAAGGGGGGCAGCTTCATCCAGCATTAGAGCTTGATAA
TCAAGTGCTCCATTTTAGTAAGGCTGGTGTTACTGACCCTTTAAAACAAGGTTTATCACCTTTTGAGCGTATTGAATACC
GATATGATCCTGATCAAAAAAAACTTTATCGTCTTAAATATAGTAATTTAAATACTTCAAATAAAGAGCAGCCCTTATCT
AGCACTTTATTGAATCAGGTTGAACAGTTTCAAATTATGGTGTTAACGCCGCAAGAAGTGACAAAGTGGCCAGAAATTAA
TCTTGATCCCACAAAGCCCGAAGAGTTTAGAAAGCTACCGAAAGGAATAAAAATACAACTCACGGTTGCTGGTGTAAGTT
ATGAGTGGATTTATAGCTTAAACCAAGGAAATTTATCGCTCTCCAAAGAAGGAGGGGCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	87.554	100	0.876