Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   ACB332_RS02290 Genome accession   NZ_CP167016
Coordinates   431782..433134 (+) Length   450 a.a.
NCBI ID   WP_129322616.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 10     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 426782..438134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB332_RS02265 (ACB332_02265) - 426931..427080 (+) 150 WP_002994198.1 hypothetical protein -
  ACB332_RS02270 (ACB332_02270) - 427475..428623 (+) 1149 WP_129322614.1 acetyl-CoA C-acyltransferase -
  ACB332_RS02275 (ACB332_02275) - 428580..429827 (+) 1248 WP_129322615.1 AMP-binding protein -
  ACB332_RS02280 (ACB332_02280) - 429883..430917 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  ACB332_RS02285 (ACB332_02285) vicR 431079..431789 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ACB332_RS02290 (ACB332_02290) vicK 431782..433134 (+) 1353 WP_129322616.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACB332_RS02295 (ACB332_02295) vicX 433138..433947 (+) 810 WP_129322617.1 MBL fold metallo-hydrolase Regulator
  ACB332_RS02300 (ACB332_02300) rnc 434401..435093 (+) 693 WP_002985639.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51466.97 Da        Isoelectric Point: 5.7395

>NTDB_id=1037636 ACB332_RS02290 WP_129322616.1 431782..433134(+) (vicK) [Streptococcus pyogenes strain Isolate 10]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRYLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWIEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEDDID

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=1037636 ACB332_RS02290 WP_129322616.1 431782..433134(+) (vicK) [Streptococcus pyogenes strain Isolate 10]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGATTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGATACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAAACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACCTACCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGCTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGGTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGATTGAAATTGATAATGATAAAATGACGCAGGTTATTGAAAATATCCTAAACAACGCGATTAAATACTCTCCTGA
TGGTGGGAAAATCACTGTTCGCATGAAAACAACCGACACGCAATTGATTATTTCCATCTCAGACCAAGGCTTAGGCATTC
CGAAGAAGGACCTGCCCCTTATTTTTGACCGTTTTTACCGAGTGGACAAGGCAAGAAGCCGTGCTCAAGGTGGAACTGGT
CTAGGGCTTGCCATTGCCAAAGAAATTATTAAGCAGCATCACGGGTTTATCTGGGCGAAGAGTGATTATGGCAAAGGGTC
AACCTTTACCATCGTCTTGCCATATGAAAAAGATGCTGCCATTTACGAAGAGTGGGAGGATGACATAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

73.188

92

0.673

  micB Streptococcus pneumoniae Cp1015

67.529

94.444

0.638


Multiple sequence alignment