Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | AD178_RS02820 | Genome accession | NZ_OX244288 |
| Coordinates | 544616..545665 (+) | Length | 349 a.a. |
| NCBI ID | WP_000653752.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PT8105 isolate 2RLC4 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 539616..550665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AD178_RS02790 (SAMEA1463109_00559) | - | 540496..540852 (+) | 357 | WP_000114422.1 | hypothetical protein | - |
| AD178_RS02795 (SAMEA1463109_00560) | dnaJ | 541254..542390 (+) | 1137 | WP_001066291.1 | molecular chaperone DnaJ | - |
| AD178_RS02800 (SAMEA1463109_00561) | - | 542712..542951 (-) | 240 | WP_001813906.1 | hypothetical protein | - |
| AD178_RS02805 (SAMEA1463109_00562) | - | 543113..543400 (-) | 288 | WP_000777760.1 | hypothetical protein | - |
| AD178_RS02810 (SAMEA1463109_00563) | - | 543410..543820 (-) | 411 | WP_001278301.1 | HIT family protein | - |
| AD178_RS02815 (SAMEA1463109_00564) | pptA | 543888..544619 (+) | 732 | WP_000889917.1 | ABC transporter ATP-binding protein | Regulator |
| AD178_RS02820 (SAMEA1463109_00565) | pptB | 544616..545665 (+) | 1050 | WP_000653752.1 | ABC transporter permease | Regulator |
| AD178_RS02825 (SAMEA1463109_00566) | - | 545726..546055 (-) | 330 | WP_000132576.1 | hypothetical protein | - |
| AD178_RS02830 (SAMEA1463109_00567) | - | 546331..546669 (+) | 339 | WP_000682121.1 | LytTR family DNA-binding domain-containing protein | - |
| AD178_RS02835 (SAMEA1463109_00568) | comE/blpR | 546674..547411 (+) | 738 | WP_001219145.1 | response regulator transcription factor | Regulator |
| AD178_RS02840 (SAMEA1463109_00569) | - | 547425..548765 (+) | 1341 | WP_001017620.1 | sensor histidine kinase | - |
| AD178_RS02845 (SAMEA1463109_00570) | blpC | 548807..548962 (-) | 156 | WP_000358817.1 | quorum-sensing system pheromone BlpC | - |
| AD178_RS02850 (SAMEA1463109_00571) | - | 549019..550380 (-) | 1362 | WP_001069073.1 | bacteriocin secretion accessory protein | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 40652.84 Da Isoelectric Point: 9.9405
>NTDB_id=1037512 AD178_RS02820 WP_000653752.1 544616..545665(+) (pptB) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
MKDLFLKRKQAFRKECLCYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLFVGITSVLLLLWGGIATYMEA
PDKLFLLVGEEEIKLHLKRQTGISLVFWIFVQTLFLLLFAPLFLVMGYGLPVFLVYVLLLGVGKYFLFRQKASKFFTETG
LDWDYVISQESKRKQVLLRFFALFTQVKGISNSVKRRAYLDFILKVVQKVSGKIWQNLYLRSYLRNGDLFALSLRLLLLS
LLAQVFIEQSWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVRGLISFVLLVELVVGLITFQE
KLALLALLGAGLVLLVLYLPYQVKRQMQD
MKDLFLKRKQAFRKECLCYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLFVGITSVLLLLWGGIATYMEA
PDKLFLLVGEEEIKLHLKRQTGISLVFWIFVQTLFLLLFAPLFLVMGYGLPVFLVYVLLLGVGKYFLFRQKASKFFTETG
LDWDYVISQESKRKQVLLRFFALFTQVKGISNSVKRRAYLDFILKVVQKVSGKIWQNLYLRSYLRNGDLFALSLRLLLLS
LLAQVFIEQSWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVRGLISFVLLVELVVGLITFQE
KLALLALLGAGLVLLVLYLPYQVKRQMQD
Nucleotide
Download Length: 1050 bp
>NTDB_id=1037512 AD178_RS02820 WP_000653752.1 544616..545665(+) (pptB) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
ATGAAAGACTTGTTTTTAAAGAGAAAGCAGGCCTTTCGTAAGGAGTGTCTTTGTTATCTGCGCTATGTGCTCAATGACCA
CTTTGTCTTGTTCCTGCTTGTCCTGTTGGGCTTTCTAGCCTACCAGTACAGTCAACTCTTACAACATTTTCCTGAAAATC
ATTGGCCTATCCTTTTGTTTGTAGGAATTACGTCTGTTTTACTTTTACTTTGGGGAGGAATTGCCACCTATATGGAGGCT
CCAGACAAGCTCTTTCTCTTAGTTGGAGAAGAGGAAATCAAGCTCCATCTCAAGCGTCAAACCGGCATTTCCCTAGTCTT
TTGGATTTTTGTTCAGACCCTCTTCTTGCTGTTATTTGCGCCCTTGTTTTTAGTCATGGGTTATGGCTTGCCTGTTTTTC
TGGTCTATGTGCTTTTATTGGGGGTAGGAAAATATTTCCTCTTTCGTCAAAAGGCCAGCAAATTTTTCACTGAAACTGGA
CTGGATTGGGACTATGTCATTTCCCAAGAAAGCAAGCGTAAGCAAGTCTTGCTTCGTTTCTTTGCCCTCTTTACGCAGGT
CAAGGGAATTTCAAACAGCGTCAAGCGTCGTGCCTATCTGGACTTTATTCTAAAGGTTGTTCAGAAGGTGTCTGGGAAGA
TTTGGCAAAATCTCTATCTGCGTTCTTATTTGCGAAATGGAGACCTTTTTGCCCTTAGTCTCCGTCTGCTCTTGCTTTCT
TTGCTGGCGCAGGTCTTTATCGAGCAATCTTGGATTGCGACAGCAGTGGTAGTTCTCTTTAACTACCTCTTGCTTTTCCA
GTTGCTGGCCCTCTATCATGCCTTTGACTACCAGTATTTGACCCAACTCTTTCCGCTGGACAAGGGGCAAAAGGAAAAAG
GCTTACAGGAGGTAGTTCGAGGATTGATCAGTTTTGTTTTACTTGTGGAATTAGTTGTTGGGTTGATTACCTTCCAAGAA
AAACTAGCCCTTCTAGCCTTACTAGGAGCTGGTTTGGTTTTACTAGTCTTGTACCTACCTTATCAGGTAAAACGTCAGAT
GCAGGACTAA
ATGAAAGACTTGTTTTTAAAGAGAAAGCAGGCCTTTCGTAAGGAGTGTCTTTGTTATCTGCGCTATGTGCTCAATGACCA
CTTTGTCTTGTTCCTGCTTGTCCTGTTGGGCTTTCTAGCCTACCAGTACAGTCAACTCTTACAACATTTTCCTGAAAATC
ATTGGCCTATCCTTTTGTTTGTAGGAATTACGTCTGTTTTACTTTTACTTTGGGGAGGAATTGCCACCTATATGGAGGCT
CCAGACAAGCTCTTTCTCTTAGTTGGAGAAGAGGAAATCAAGCTCCATCTCAAGCGTCAAACCGGCATTTCCCTAGTCTT
TTGGATTTTTGTTCAGACCCTCTTCTTGCTGTTATTTGCGCCCTTGTTTTTAGTCATGGGTTATGGCTTGCCTGTTTTTC
TGGTCTATGTGCTTTTATTGGGGGTAGGAAAATATTTCCTCTTTCGTCAAAAGGCCAGCAAATTTTTCACTGAAACTGGA
CTGGATTGGGACTATGTCATTTCCCAAGAAAGCAAGCGTAAGCAAGTCTTGCTTCGTTTCTTTGCCCTCTTTACGCAGGT
CAAGGGAATTTCAAACAGCGTCAAGCGTCGTGCCTATCTGGACTTTATTCTAAAGGTTGTTCAGAAGGTGTCTGGGAAGA
TTTGGCAAAATCTCTATCTGCGTTCTTATTTGCGAAATGGAGACCTTTTTGCCCTTAGTCTCCGTCTGCTCTTGCTTTCT
TTGCTGGCGCAGGTCTTTATCGAGCAATCTTGGATTGCGACAGCAGTGGTAGTTCTCTTTAACTACCTCTTGCTTTTCCA
GTTGCTGGCCCTCTATCATGCCTTTGACTACCAGTATTTGACCCAACTCTTTCCGCTGGACAAGGGGCAAAAGGAAAAAG
GCTTACAGGAGGTAGTTCGAGGATTGATCAGTTTTGTTTTACTTGTGGAATTAGTTGTTGGGTTGATTACCTTCCAAGAA
AAACTAGCCCTTCTAGCCTTACTAGGAGCTGGTTTGGTTTTACTAGTCTTGTACCTACCTTATCAGGTAAAACGTCAGAT
GCAGGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus salivarius strain HSISS4 |
47.429 |
100 |
0.476 |
| pptB | Streptococcus thermophilus LMD-9 |
46.571 |
100 |
0.467 |