Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACB352_RS09855 Genome accession   NZ_CP167009
Coordinates   1928500..1929276 (+) Length   258 a.a.
NCBI ID   WP_021340715.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 22     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1923500..1934276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB352_RS09835 (ACB352_09835) - 1925327..1926101 (-) 775 Protein_1878 IS30 family transposase -
  ACB352_RS09845 (ACB352_09845) rlmH 1926497..1926976 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACB352_RS09850 (ACB352_09850) htrA 1927188..1928411 (+) 1224 WP_011285340.1 S1C family serine protease Regulator
  ACB352_RS09855 (ACB352_09855) spo0J 1928500..1929276 (+) 777 WP_021340715.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29027.83 Da        Isoelectric Point: 10.2588

>NTDB_id=1037338 ACB352_RS09855 WP_021340715.1 1928500..1929276(+) (spo0J) [Streptococcus pyogenes strain Isolate 22]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1037338 ACB352_RS09855 WP_021340715.1 1928500..1929276(+) (spo0J) [Streptococcus pyogenes strain Isolate 22]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAACCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGTATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTACTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585


Multiple sequence alignment