Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ACB340_RS00335 Genome accession   NZ_CP167005
Coordinates   54209..54304 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 27     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49209..59304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB340_RS00320 (ACB340_00320) - 50085..51782 (+) 1698 WP_115224516.1 AIPR family protein -
  ACB340_RS00325 (ACB340_00325) purB 51800..53092 (+) 1293 WP_023079043.1 adenylosuccinate lyase -
  ACB340_RS00330 (ACB340_00330) comR 53223..54125 (+) 903 WP_032460886.1 transcriptional regulator Rgg4/ComR Regulator
  ACB340_RS00335 (ACB340_00335) comS 54209..54304 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  ACB340_RS00340 (ACB340_00340) ruvB 54351..55349 (+) 999 WP_014407198.1 Holliday junction branch migration DNA helicase RuvB -
  ACB340_RS00345 (ACB340_00345) - 55487..55924 (+) 438 WP_023079047.1 low molecular weight protein-tyrosine-phosphatase -
  ACB340_RS00350 (ACB340_00350) - 55947..56348 (+) 402 WP_032465955.1 MORN repeat-containing protein -
  ACB340_RS00355 (ACB340_00355) - 56345..58120 (+) 1776 WP_023079046.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=1037067 ACB340_RS00335 WP_198462994.1 54209..54304(+) (comS) [Streptococcus pyogenes strain Isolate 27]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1037067 ACB340_RS00335 WP_198462994.1 54209..54304(+) (comS) [Streptococcus pyogenes strain Isolate 27]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment