Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACB354_RS07730 Genome accession   NZ_CP167004
Coordinates   1467756..1468565 (-) Length   269 a.a.
NCBI ID   WP_011184291.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 28     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1462756..1473565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB354_RS07720 (ACB354_07725) smc 1463092..1466631 (-) 3540 WP_011184292.1 chromosome segregation protein SMC -
  ACB354_RS07725 (ACB354_07730) rnc 1466632..1467324 (-) 693 WP_002985639.1 ribonuclease III -
  ACB354_RS07730 (ACB354_07735) vicX 1467756..1468565 (-) 810 WP_011184291.1 MBL fold metallo-hydrolase Regulator
  ACB354_RS07735 (ACB354_07740) vicK 1468569..1469921 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACB354_RS07740 (ACB354_07745) vicR 1469914..1470624 (-) 711 WP_002985645.1 response regulator YycF Regulator
  ACB354_RS07745 (ACB354_07750) - 1470786..1471820 (-) 1035 WP_011184290.1 DUF3114 domain-containing protein -
  ACB354_RS07750 (ACB354_07755) - 1471876..1473123 (-) 1248 WP_011184289.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=1037051 ACB354_RS07730 WP_011184291.1 1467756..1468565(-) (vicX) [Streptococcus pyogenes strain Isolate 28]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1037051 ACB354_RS07730 WP_011184291.1 1467756..1468565(-) (vicX) [Streptococcus pyogenes strain Isolate 28]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCAGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCGGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment