Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACAW63_RS06945 Genome accession   NZ_CP166873
Coordinates   1528758..1529165 (+) Length   135 a.a.
NCBI ID   WP_015475142.1    Uniprot ID   A0AA42HJ21
Organism   Pseudomonas sp. QE6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1523758..1534165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAW63_RS06920 (ACAW63_06915) pyrR 1524832..1525344 (-) 513 WP_371232625.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACAW63_RS06925 (ACAW63_06920) ruvX 1525496..1525933 (-) 438 WP_088416421.1 Holliday junction resolvase RuvX -
  ACAW63_RS06930 (ACAW63_06925) - 1525930..1526499 (-) 570 WP_275609802.1 YqgE/AlgH family protein -
  ACAW63_RS06935 (ACAW63_06930) - 1526576..1527469 (-) 894 WP_371232627.1 TonB family protein -
  ACAW63_RS06940 (ACAW63_06935) gshB 1527526..1528488 (-) 963 WP_371232629.1 glutathione synthase -
  ACAW63_RS06945 (ACAW63_06940) pilG 1528758..1529165 (+) 408 WP_015475142.1 twitching motility response regulator PilG Regulator
  ACAW63_RS06950 (ACAW63_06945) pilH 1529212..1529577 (+) 366 WP_009615257.1 twitching motility response regulator PilH -
  ACAW63_RS06955 (ACAW63_06950) - 1529640..1530176 (+) 537 WP_275609805.1 chemotaxis protein CheW -
  ACAW63_RS06960 (ACAW63_06955) - 1530257..1532305 (+) 2049 WP_371232632.1 methyl-accepting chemotaxis protein -
  ACAW63_RS06965 (ACAW63_06960) - 1532365..1533228 (+) 864 WP_371232634.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14810.17 Da        Isoelectric Point: 6.8621

>NTDB_id=1035870 ACAW63_RS06945 WP_015475142.1 1528758..1529165(+) (pilG) [Pseudomonas sp. QE6]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEHAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1035870 ACAW63_RS06945 WP_015475142.1 1528758..1529165(+) (pilG) [Pseudomonas sp. QE6]
ATGGAACAGCATTCCGACGGTTTGAAAGTGATGGTGATCGACGACTCCAAGACGATTCGTCGCACCGCCGAAACCCTGCT
GAAGAAAGTCGGCTGCGATGTCATCACAGCCATCGACGGCTTCGACGCCCTGGCCAAGATTGCCGATACCCATCCCAGCA
TCATCTTCGTCGACATCATGATGCCCCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGTGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGCATCGTCGGTTCCGACCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGCGCGATCAAGACCCATGTGCCTGACTTTACCCCGGTGGAGCACG
CTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

42.063

93.333

0.393

Multiple sequence alignment