Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACA109_RS08220 Genome accession   NZ_CP166872
Coordinates   1607460..1608446 (-) Length   328 a.a.
NCBI ID   WP_371256554.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 24EBSta0529     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context


Location: 1602460..1613446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACA109_RS08195 (ACA109_08195) - 1602717..1603064 (-) 348 WP_001242107.1 hypothetical protein -
  ACA109_RS08200 (ACA109_08200) - 1603250..1603843 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  ACA109_RS08205 (ACA109_08205) - 1603947..1604312 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  ACA109_RS08210 (ACA109_08210) yjbH 1604335..1605141 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  ACA109_RS08215 (ACA109_08215) pepF 1605604..1607412 (-) 1809 WP_308889212.1 oligoendopeptidase F -
  ACA109_RS08220 (ACA109_08220) coiA 1607460..1608446 (-) 987 WP_371256554.1 competence protein CoiA Machinery gene
  ACA109_RS08225 (ACA109_08225) mecA 1608567..1609286 (-) 720 WP_001217728.1 adaptor protein MecA -
  ACA109_RS08230 (ACA109_08230) spxA 1609657..1610052 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACA109_RS08235 (ACA109_08235) trpS 1610347..1611336 (+) 990 WP_371256555.1 tryptophan--tRNA ligase -
  ACA109_RS08240 (ACA109_08240) opp4C 1611378..1612259 (-) 882 WP_001180264.1 oligopeptide ABC transporter permease -
  ACA109_RS08245 (ACA109_08245) opp4B 1612271..1613233 (-) 963 WP_000593417.1 oligopeptide ABC transporter permease -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38703.29 Da        Isoelectric Point: 9.6574

>NTDB_id=1035847 ACA109_RS08220 WP_371256554.1 1607460..1608446(-) (coiA) [Staphylococcus aureus strain 24EBSta0529]
MLVALNGEKERVLATTALRKTQYFCPACGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1035847 ACA109_RS08220 WP_371256554.1 1607460..1608446(-) (coiA) [Staphylococcus aureus strain 24EBSta0529]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGC
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACAGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963

  coiA Staphylococcus aureus MW2

96.341

100

0.963


Multiple sequence alignment