Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   ACA109_RS08085 Genome accession   NZ_CP166872
Coordinates   1577365..1577934 (+) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain 24EBSta0529     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1572365..1582934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACA109_RS08050 (ACA109_08050) - 1573583..1573870 (-) 288 WP_000478237.1 lactococcin 972 family bacteriocin -
  ACA109_RS08055 (ACA109_08055) - 1573862..1573960 (-) 99 Protein_1554 hypothetical protein -
  ACA109_RS08060 (ACA109_08060) - 1574499..1574576 (-) 78 WP_099112139.1 putative holin-like toxin -
  ACA109_RS08065 (ACA109_08065) - 1574878..1575480 (-) 603 WP_234773354.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  ACA109_RS08070 (ACA109_08070) - 1575495..1575671 (-) 177 WP_000214898.1 YkvS family protein -
  ACA109_RS08075 (ACA109_08075) - 1575870..1576856 (+) 987 WP_371256547.1 lipoate--protein ligase -
  ACA109_RS08080 (ACA109_08080) - 1576937..1577155 (-) 219 WP_000876826.1 IDEAL domain-containing protein -
  ACA109_RS08085 (ACA109_08085) comK/comK1 1577365..1577934 (+) 570 WP_000287265.1 competence protein ComK Regulator
  ACA109_RS08100 (ACA109_08100) - 1578423..1579934 (-) 1512 WP_371256548.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  ACA109_RS08105 (ACA109_08105) - 1580073..1581431 (-) 1359 WP_000021872.1 TrkH family potassium uptake protein -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=1035846 ACA109_RS08085 WP_000287265.1 1577365..1577934(+) (comK/comK1) [Staphylococcus aureus strain 24EBSta0529]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=1035846 ACA109_RS08085 WP_000287265.1 1577365..1577934(+) (comK/comK1) [Staphylococcus aureus strain 24EBSta0529]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGCGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACTCATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment