Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | ABKQ09_RS06145 | Genome accession | NZ_CP166870 |
| Coordinates | 1239512..1240675 (+) | Length | 387 a.a. |
| NCBI ID | WP_328184600.1 | Uniprot ID | - |
| Organism | Bacillus atrophaeus strain F4 | ||
| Function | homologous recombination; DNA uptake (predicted from homology) Homologous recombination DNA binding and uptake |
||
Genomic Context
Location: 1234512..1245675
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABKQ09_RS06115 (ABKQ09_06115) | - | 1234829..1235179 (-) | 351 | WP_326106709.1 | hypothetical protein | - |
| ABKQ09_RS06120 (ABKQ09_06120) | - | 1235233..1236414 (+) | 1182 | WP_371176578.1 | putative glycoside hydrolase | - |
| ABKQ09_RS06125 (ABKQ09_06125) | - | 1236564..1237142 (+) | 579 | WP_003327580.1 | GNAT family N-acetyltransferase | - |
| ABKQ09_RS06130 (ABKQ09_06130) | spx | 1237323..1237718 (+) | 396 | WP_003327578.1 | transcriptional regulator Spx | - |
| ABKQ09_RS06135 (ABKQ09_06135) | - | 1237754..1238416 (-) | 663 | WP_003327577.1 | TerC family protein | - |
| ABKQ09_RS06140 (ABKQ09_06140) | mecA | 1238696..1239352 (+) | 657 | WP_003327576.1 | adaptor protein MecA | Regulator |
| ABKQ09_RS06145 (ABKQ09_06145) | coiA | 1239512..1240675 (+) | 1164 | WP_328184600.1 | competence protein CoiA family protein | Machinery gene |
| ABKQ09_RS06150 (ABKQ09_06150) | pepF | 1240904..1242733 (+) | 1830 | WP_371176579.1 | oligoendopeptidase F | - |
| ABKQ09_RS06155 (ABKQ09_06155) | - | 1242769..1242936 (-) | 168 | WP_003327573.1 | hypothetical protein | - |
| ABKQ09_RS06160 (ABKQ09_06160) | spxH | 1243249..1244151 (-) | 903 | WP_106034588.1 | protease adaptor protein SpxH | - |
| ABKQ09_RS06165 (ABKQ09_06165) | - | 1244148..1244546 (-) | 399 | WP_013390470.1 | thiol management oxidoreductase | - |
| ABKQ09_RS06170 (ABKQ09_06170) | - | 1244814..1245524 (-) | 711 | WP_268365846.1 | lytic transglycosylase domain-containing protein | - |
Sequence
Protein
Download Length: 387 a.a. Molecular weight: 45346.89 Da Isoelectric Point: 9.7346
>NTDB_id=1035742 ABKQ09_RS06145 WP_328184600.1 1239512..1240675(+) (coiA) [Bacillus atrophaeus strain F4]
MFSAVTSEGKTVYLMKERYAATEASELRKTKFFCPVCREQLDVKLGSLKAPHFAHKQNKACTIEFEPESAYHLEGKKQLY
SWLKAKGCSPILEPYVKSIQQRPDIMANVQGDMLAFEFQCANLAPDLLYKRTQGLKQAGAEPLWIIGGNRLKRTSRHFFQ
LSAFHWQFMKENPRQFLLFYCPEARSFYKLHHITPFYANYACASLEAIPLTKANVKDMWFSASAPSFQPAAWQSAITRFR
HKPPRFLSKEANHLRLLFYEKRQTPLPFLPPEVFAPIPLGAVFLSPVFIWQGHLYLYMTDLAEKRMSIRFSAVFRFCKMQ
IRKKRIHLRYENSEHLLREALKQYINFLCRKEFLIEGEKEVYMVKYPVHDCRTLEGVMERDQTCFGE
MFSAVTSEGKTVYLMKERYAATEASELRKTKFFCPVCREQLDVKLGSLKAPHFAHKQNKACTIEFEPESAYHLEGKKQLY
SWLKAKGCSPILEPYVKSIQQRPDIMANVQGDMLAFEFQCANLAPDLLYKRTQGLKQAGAEPLWIIGGNRLKRTSRHFFQ
LSAFHWQFMKENPRQFLLFYCPEARSFYKLHHITPFYANYACASLEAIPLTKANVKDMWFSASAPSFQPAAWQSAITRFR
HKPPRFLSKEANHLRLLFYEKRQTPLPFLPPEVFAPIPLGAVFLSPVFIWQGHLYLYMTDLAEKRMSIRFSAVFRFCKMQ
IRKKRIHLRYENSEHLLREALKQYINFLCRKEFLIEGEKEVYMVKYPVHDCRTLEGVMERDQTCFGE
Nucleotide
Download Length: 1164 bp
>NTDB_id=1035742 ABKQ09_RS06145 WP_328184600.1 1239512..1240675(+) (coiA) [Bacillus atrophaeus strain F4]
TTGTTTAGTGCTGTGACATCAGAAGGTAAAACTGTTTACCTGATGAAAGAAAGATATGCTGCAACAGAAGCGTCGGAATT
GAGAAAAACGAAATTCTTTTGTCCGGTTTGCAGAGAACAGCTCGATGTCAAGCTCGGCTCTTTAAAAGCTCCGCATTTTG
CCCATAAGCAGAATAAAGCTTGCACCATAGAGTTTGAACCGGAGAGCGCCTACCATTTAGAAGGGAAAAAGCAGCTTTAT
TCTTGGCTGAAGGCGAAAGGATGCTCACCTATTCTGGAGCCATATGTAAAAAGCATACAGCAAAGGCCTGACATTATGGC
AAATGTACAAGGAGACATGCTGGCTTTTGAATTTCAATGCGCGAACCTCGCTCCAGACCTCTTATATAAACGCACGCAAG
GCTTAAAGCAAGCAGGGGCTGAACCGCTCTGGATCATCGGCGGAAACCGTTTAAAACGCACGTCAAGGCACTTTTTCCAG
CTATCTGCTTTTCATTGGCAATTCATGAAGGAGAATCCACGGCAGTTCCTGTTGTTTTACTGTCCGGAAGCACGCTCCTT
CTATAAGCTCCATCATATTACCCCGTTCTATGCGAATTATGCCTGCGCCTCACTCGAAGCAATCCCGCTCACAAAAGCAA
ATGTGAAGGATATGTGGTTCTCAGCATCCGCACCTTCCTTTCAGCCTGCTGCCTGGCAAAGCGCCATTACCCGTTTTCGG
CATAAACCTCCCCGTTTTTTATCCAAAGAAGCGAATCATCTGCGGCTCCTTTTTTATGAAAAACGCCAGACGCCGCTCCC
ATTTTTACCGCCTGAAGTATTTGCCCCCATTCCTCTTGGAGCCGTTTTTTTAAGTCCTGTTTTCATATGGCAGGGCCATC
TTTATCTGTATATGACCGACCTCGCAGAAAAGCGTATGTCCATCAGGTTTTCTGCTGTTTTTCGATTTTGTAAGATGCAG
ATTCGAAAAAAACGGATTCATTTAAGGTACGAAAATAGCGAACATCTTTTACGTGAGGCATTGAAACAGTACATCAATTT
TCTGTGCCGGAAGGAATTTTTAATAGAGGGTGAGAAAGAAGTATATATGGTGAAATATCCAGTTCATGACTGCCGCACGC
TTGAGGGTGTTATGGAGCGCGACCAAACCTGTTTTGGGGAATGA
TTGTTTAGTGCTGTGACATCAGAAGGTAAAACTGTTTACCTGATGAAAGAAAGATATGCTGCAACAGAAGCGTCGGAATT
GAGAAAAACGAAATTCTTTTGTCCGGTTTGCAGAGAACAGCTCGATGTCAAGCTCGGCTCTTTAAAAGCTCCGCATTTTG
CCCATAAGCAGAATAAAGCTTGCACCATAGAGTTTGAACCGGAGAGCGCCTACCATTTAGAAGGGAAAAAGCAGCTTTAT
TCTTGGCTGAAGGCGAAAGGATGCTCACCTATTCTGGAGCCATATGTAAAAAGCATACAGCAAAGGCCTGACATTATGGC
AAATGTACAAGGAGACATGCTGGCTTTTGAATTTCAATGCGCGAACCTCGCTCCAGACCTCTTATATAAACGCACGCAAG
GCTTAAAGCAAGCAGGGGCTGAACCGCTCTGGATCATCGGCGGAAACCGTTTAAAACGCACGTCAAGGCACTTTTTCCAG
CTATCTGCTTTTCATTGGCAATTCATGAAGGAGAATCCACGGCAGTTCCTGTTGTTTTACTGTCCGGAAGCACGCTCCTT
CTATAAGCTCCATCATATTACCCCGTTCTATGCGAATTATGCCTGCGCCTCACTCGAAGCAATCCCGCTCACAAAAGCAA
ATGTGAAGGATATGTGGTTCTCAGCATCCGCACCTTCCTTTCAGCCTGCTGCCTGGCAAAGCGCCATTACCCGTTTTCGG
CATAAACCTCCCCGTTTTTTATCCAAAGAAGCGAATCATCTGCGGCTCCTTTTTTATGAAAAACGCCAGACGCCGCTCCC
ATTTTTACCGCCTGAAGTATTTGCCCCCATTCCTCTTGGAGCCGTTTTTTTAAGTCCTGTTTTCATATGGCAGGGCCATC
TTTATCTGTATATGACCGACCTCGCAGAAAAGCGTATGTCCATCAGGTTTTCTGCTGTTTTTCGATTTTGTAAGATGCAG
ATTCGAAAAAAACGGATTCATTTAAGGTACGAAAATAGCGAACATCTTTTACGTGAGGCATTGAAACAGTACATCAATTT
TCTGTGCCGGAAGGAATTTTTAATAGAGGGTGAGAAAGAAGTATATATGGTGAAATATCCAGTTCATGACTGCCGCACGC
TTGAGGGTGTTATGGAGCGCGACCAAACCTGTTTTGGGGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Bacillus subtilis subsp. subtilis str. 168 |
57.609 |
95.09 |
0.548 |