Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   ABKQ09_RS06140 Genome accession   NZ_CP166870
Coordinates   1238696..1239352 (+) Length   218 a.a.
NCBI ID   WP_003327576.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain F4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1233696..1244352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKQ09_RS06110 (ABKQ09_06110) oppF 1233923..1234840 (+) 918 WP_106047310.1 oligopeptide ABC transporter ATP-binding protein OppF -
  ABKQ09_RS06115 (ABKQ09_06115) - 1234829..1235179 (-) 351 WP_326106709.1 hypothetical protein -
  ABKQ09_RS06120 (ABKQ09_06120) - 1235233..1236414 (+) 1182 WP_371176578.1 putative glycoside hydrolase -
  ABKQ09_RS06125 (ABKQ09_06125) - 1236564..1237142 (+) 579 WP_003327580.1 GNAT family N-acetyltransferase -
  ABKQ09_RS06130 (ABKQ09_06130) spx 1237323..1237718 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  ABKQ09_RS06135 (ABKQ09_06135) - 1237754..1238416 (-) 663 WP_003327577.1 TerC family protein -
  ABKQ09_RS06140 (ABKQ09_06140) mecA 1238696..1239352 (+) 657 WP_003327576.1 adaptor protein MecA Regulator
  ABKQ09_RS06145 (ABKQ09_06145) coiA 1239512..1240675 (+) 1164 WP_328184600.1 competence protein CoiA family protein Machinery gene
  ABKQ09_RS06150 (ABKQ09_06150) pepF 1240904..1242733 (+) 1830 WP_371176579.1 oligoendopeptidase F -
  ABKQ09_RS06155 (ABKQ09_06155) - 1242769..1242936 (-) 168 WP_003327573.1 hypothetical protein -
  ABKQ09_RS06160 (ABKQ09_06160) spxH 1243249..1244151 (-) 903 WP_106034588.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 26004.74 Da        Isoelectric Point: 3.9956

>NTDB_id=1035741 ABKQ09_RS06140 WP_003327576.1 1238696..1239352(+) (mecA) [Bacillus atrophaeus strain F4]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEQADENLDALLDDFQKEEQADNQEEKEQKLQFVLRFDDFEDLISLSNLNVNGSKTTLYSFENR
YYLYVDFQEMSDEEVENQLSILLEYTYESSISIHRIEEYGKLIISEDVLNTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=1035741 ABKQ09_RS06140 WP_003327576.1 1238696..1239352(+) (mecA) [Bacillus atrophaeus strain F4]
ATGGAAATAGAAAGAATAAACGAACATACTGTAAAGTTTTATATGTCATATGGAGATATTGAAGACCGCGGTTTCGACAG
AGAAGAGATTTGGTATAACCGTGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGAGGAAGAAGAAT
TCGCTGTAGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTCGATAAAGGCTTGGAGATTATCGTTACAAAAGCCCAGCTT
TCTAAAGACGGACAAAAGCTCGAACTGCCGATACCTGAAGATAAAAAGCAAGAACAAGCAGATGAGAATCTCGATGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGCCGACAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTCGTCTTGCGGTTTG
ATGATTTTGAGGACTTGATTTCTCTTTCAAATTTGAACGTAAACGGAAGCAAAACGACGCTTTATTCGTTTGAAAACCGG
TATTATTTATATGTAGATTTTCAAGAAATGTCTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTAGAGTACACATA
TGAATCCTCAATCAGCATACACCGCATCGAAGAATACGGCAAGCTGATTATTTCAGAGGATGTTCTGAATACAATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

92.661

100

0.927

Multiple sequence alignment