Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABKQ09_RS06030 Genome accession   NZ_CP166870
Coordinates   1216966..1217157 (+) Length   63 a.a.
NCBI ID   WP_010788228.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain F4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1211966..1222157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKQ09_RS06000 (ABKQ09_06000) argF 1212808..1213778 (+) 971 Protein_1126 ornithine carbamoyltransferase -
  ABKQ09_RS06005 (ABKQ09_06005) - 1213860..1214039 (+) 180 WP_003327605.1 YjzC family protein -
  ABKQ09_RS06010 (ABKQ09_06010) - 1214068..1214256 (-) 189 WP_003327604.1 YjzD family protein -
  ABKQ09_RS06015 (ABKQ09_06015) - 1214516..1215250 (+) 735 WP_003327603.1 hypothetical protein -
  ABKQ09_RS06020 (ABKQ09_06020) - 1215333..1215908 (+) 576 WP_010788226.1 hypothetical protein -
  ABKQ09_RS06025 (ABKQ09_06025) med 1215998..1216951 (+) 954 WP_371176445.1 BMP family ABC transporter substrate-binding protein Regulator
  ABKQ09_RS06030 (ABKQ09_06030) comZ 1216966..1217157 (+) 192 WP_010788228.1 ComZ family protein Regulator
  ABKQ09_RS06035 (ABKQ09_06035) - 1217187..1217414 (-) 228 WP_003327598.1 hypothetical protein -
  ABKQ09_RS06040 (ABKQ09_06040) fabH 1217586..1218524 (+) 939 WP_003327597.1 beta-ketoacyl-ACP synthase III -
  ABKQ09_RS06045 (ABKQ09_06045) fabF 1218546..1219784 (+) 1239 WP_003327596.1 beta-ketoacyl-ACP synthase II -
  ABKQ09_RS06050 (ABKQ09_06050) - 1219862..1220647 (+) 786 WP_268365855.1 DUF2268 domain-containing protein -
  ABKQ09_RS06055 (ABKQ09_06055) - 1220839..1221825 (+) 987 WP_214917956.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7112.08 Da        Isoelectric Point: 4.2564

>NTDB_id=1035738 ABKQ09_RS06030 WP_010788228.1 1216966..1217157(+) (comZ) [Bacillus atrophaeus strain F4]
MQHEKSLEFLQIAMKYLPEAKAELEKSGIELSAESIQPFMNLFSTVMAEAYELGKSDAKSENE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1035738 ABKQ09_RS06030 WP_010788228.1 1216966..1217157(+) (comZ) [Bacillus atrophaeus strain F4]
ATGCAGCATGAAAAATCACTTGAATTTTTGCAAATCGCGATGAAATATTTGCCGGAAGCAAAAGCGGAGCTGGAAAAATC
GGGGATCGAGTTGTCCGCAGAGTCCATACAGCCATTTATGAATCTGTTTTCAACGGTGATGGCGGAAGCTTACGAGCTTG
GCAAGTCCGACGCAAAATCAGAAAATGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

90.476

100

0.905

Multiple sequence alignment