Detailed information NTG1035737

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABKQ09_RS06025
• Genome accession: NZ_CP166870
• Coordinates: 1215998..1216951 (+)
• Length: 317 a.a.
• NCBI ID: WP_371176445.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain F4
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1210998..1221951

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKQ09_RS06000 (ABKQ09_06000)	argF	1212808..1213778 (+)	971	Protein_1126	ornithine carbamoyltransferase	-
ABKQ09_RS06005 (ABKQ09_06005)	-	1213860..1214039 (+)	180	WP_003327605.1	YjzC family protein	-
ABKQ09_RS06010 (ABKQ09_06010)	-	1214068..1214256 (-)	189	WP_003327604.1	YjzD family protein	-
ABKQ09_RS06015 (ABKQ09_06015)	-	1214516..1215250 (+)	735	WP_003327603.1	hypothetical protein	-
ABKQ09_RS06020 (ABKQ09_06020)	-	1215333..1215908 (+)	576	WP_010788226.1	hypothetical protein	-
ABKQ09_RS06025 (ABKQ09_06025)	med	1215998..1216951 (+)	954	WP_371176445.1	BMP family ABC transporter substrate-binding protein	Regulator
ABKQ09_RS06030 (ABKQ09_06030)	comZ	1216966..1217157 (+)	192	WP_010788228.1	ComZ family protein	Regulator
ABKQ09_RS06035 (ABKQ09_06035)	-	1217187..1217414 (-)	228	WP_003327598.1	hypothetical protein	-
ABKQ09_RS06040 (ABKQ09_06040)	fabH	1217586..1218524 (+)	939	WP_003327597.1	beta-ketoacyl-ACP synthase III	-
ABKQ09_RS06045 (ABKQ09_06045)	fabF	1218546..1219784 (+)	1239	WP_003327596.1	beta-ketoacyl-ACP synthase II	-
ABKQ09_RS06050 (ABKQ09_06050)	-	1219862..1220647 (+)	786	WP_268365855.1	DUF2268 domain-containing protein	-
ABKQ09_RS06055 (ABKQ09_06055)	-	1220839..1221825 (+)	987	WP_214917956.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35449.99 Da
• Isoelectric Point: 4.4404

>NTDB_id=1035737 ABKQ09_RS06025 WP_371176445.1 1215998..1216951(+) (med) [Bacillus atrophaeus strain F4]
MITRLVMIFSVLLLLNGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLSIQSAYNVDVYYKEGVKTDEDILNAIED
YHKRGINLLFGHGSEYEEMFNLVSEDYPDMEFVISNAESKADNVTSVHLNGEAMGFFGGMTAAHMSKTNQIGVIASFKWQ
PEVDGFIKGAKYENPDIIINTKYTDHWDDDTTAVKLYEKIKEEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYGIIAEQYSNGILESGDHYFDFKDHVVEMGTFSPLVDKAFQDKIAALIKTYNRTDELPKKE

Nucleotide

• Length: 954 bp

>NTDB_id=1035737 ABKQ09_RS06025 WP_371176445.1 1215998..1216951(+) (med) [Bacillus atrophaeus strain F4]
ATGATCACTAGGCTTGTCATGATCTTTTCTGTCCTCCTGTTACTGAACGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGTATGCTCTTTCCCGATACCATCAATGATCTAGTGTGGGGAACAAAAGGGTATAAAGGTTTACTAAGTA
TACAATCTGCATATAATGTCGACGTCTATTATAAAGAAGGCGTTAAGACTGATGAGGATATATTAAACGCCATTGAAGAT
TACCACAAGAGAGGGATAAACCTTCTTTTTGGCCATGGCAGTGAATACGAAGAAATGTTTAATCTGGTCAGTGAGGATTA
CCCGGACATGGAATTTGTCATTTCTAACGCGGAATCAAAAGCCGACAACGTCACAAGCGTTCATCTTAACGGAGAAGCGA
TGGGGTTTTTCGGCGGGATGACAGCCGCACATATGTCCAAAACCAATCAAATCGGCGTGATTGCTTCTTTTAAATGGCAG
CCTGAAGTAGATGGCTTCATCAAAGGGGCCAAGTATGAAAATCCGGACATCATTATCAATACGAAATATACAGACCACTG
GGATGACGATACCACAGCCGTGAAGCTTTATGAGAAGATAAAAGAGGAAGGCGCGGATGTTGTATATCCCGCCGGAGATG
GGTATAATGTTCCTGTCATTCAACAAATTAAAAAAGACGGTCTCTATGCGATAGGCTATGTCACAGACCAGTCTGATCTG
GGCGAAAATACCGTTTTGACAAGCACTGTTCAAAATGTGGACAAGGCCTATGGCATCATAGCCGAGCAATACAGCAACGG
CATTTTGGAAAGCGGAGATCACTATTTCGATTTTAAAGATCATGTCGTTGAAATGGGGACATTCAGTCCTCTAGTTGACA
AAGCCTTCCAAGATAAAATTGCCGCTCTTATCAAAACGTATAATCGAACAGATGAACTGCCGAAAAAAGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	87.066	100	0.871