Detailed information NTG0103557

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: QUE89_RS03695
• Genome accession: NZ_AP028070
• Coordinates: 813339..814727 (-)
• Length: 462 a.a.
• NCBI ID: WP_286221893.1
• Uniprot ID: -
• Organism: Marinobacter sp. LA51
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 808339..819727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE89_RS03670	-	809877..810359 (-)	483	WP_286221888.1	PilX N-terminal domain-containing pilus assembly protein	-
QUE89_RS03675	-	810374..811510 (-)	1137	WP_286221889.1	PilW family protein	-
QUE89_RS03680	pilV	811507..811995 (-)	489	WP_286221890.1	type IV pilus modification protein PilV	-
QUE89_RS03685	-	811992..812477 (-)	486	WP_286221891.1	GspH/FimT family pseudopilin	-
QUE89_RS03690	-	812644..813216 (-)	573	WP_286221892.1	GspH/FimT family pseudopilin	-
QUE89_RS03695	pilR	813339..814727 (-)	1389	WP_286221893.1	sigma-54 dependent transcriptional regulator	Regulator
QUE89_RS03700	-	814784..816427 (-)	1644	WP_286221894.1	ATP-binding protein	-
QUE89_RS03705	-	816521..818185 (+)	1665	WP_286221895.1	NAD+ synthase	-
QUE89_RS03710	-	818207..819040 (-)	834	WP_286221896.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 51022.95 Da
• Isoelectric Point: 4.8972

>NTDB_id=103557 QUE89_RS03695 WP_286221893.1 813339..814727(-) (pilR) [Marinobacter sp. LA51]
MTTHTALIVDDEPDIRDLLEITLTRMGIKAQTASDLTSARKLLDEHSFHLCLTDMNLPDGNGIELVQWIQQHAPATPVAV
ITAYGNMDTAIQSLKAGAFDFVSKPVELPRLRELVNSALRLSQPKPEQDDASDEPGLLLGNSPQIKTLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSASGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTREIPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELGVPPLRERAADIELLG
SHILERIAREYECQPALLTPEAVSLLQDYDFPGNVRELENILERAYTLCDADRIGPEDLHLGNGGQHSTAPKDSAPDTDS
TGPETITTPDGEIDLESYLESIERQTIEKALEATRWNKTAAAKRLGISFRALRYRLKKLDME

Nucleotide

• Length: 1389 bp

>NTDB_id=103557 QUE89_RS03695 WP_286221893.1 813339..814727(-) (pilR) [Marinobacter sp. LA51]
ATGACCACTCACACCGCGCTGATTGTTGACGACGAACCAGACATTCGGGACCTGCTGGAAATCACCCTGACCCGCATGGG
TATCAAGGCACAGACCGCTTCGGACCTGACCAGCGCCCGAAAACTGCTGGACGAACACAGCTTTCATCTTTGCCTGACGG
ACATGAACCTCCCGGACGGCAATGGCATAGAACTGGTGCAGTGGATTCAGCAGCACGCGCCCGCCACCCCGGTTGCGGTG
ATCACCGCCTACGGCAACATGGATACGGCCATTCAGTCTCTGAAAGCCGGGGCATTCGACTTCGTATCCAAGCCGGTGGA
ACTACCCCGCCTACGGGAATTGGTAAACAGCGCCCTGCGACTGTCGCAGCCGAAACCAGAACAGGATGACGCCTCCGATG
AGCCTGGCTTGCTGCTGGGCAACTCGCCGCAGATCAAGACACTGCGTAACCAGACCCGCAAGCTGGCCCGAAGCCAGGCG
CCCGTGTTCATCAGCGGCGAATCTGGCAGTGGTAAAGAACTGGTCGCCAGGATGATTCATCTGCAGGGGCCGCGGCGAGA
AGGGCCTTTCATTGCGGTCAACTGTGGCGCAATCCCATCAGAGCTGATGGAGAGCGAGTTTTTTGGGCACAAGAAAGGTA
GTTTTACCGGCGCGGTGGAAAACAAAGACGGCCTGTTCCGCTCGGCCAGCGGCGGCACTCTATTCCTGGACGAAGTTGCG
GACCTTCCATTGGCAATGCAGGTTAAGCTGCTGCGCGCCATTCAGGAGAAAGCCGTGCGTCCGGTCGGGGACACCCGTGA
AATTCCAGTCGACATTCGAGTTCTCAGCGCCACCCACAAGAATTTGCCGGAGCTTGTGCAGGAAGGCAGCTTTCGCCAAG
ATCTGTTTTATCGCATCAACGTGATTGAGCTTGGTGTTCCCCCTCTTAGGGAAAGGGCTGCAGATATTGAGCTTCTCGGG
TCACACATACTTGAACGCATTGCCCGTGAGTATGAGTGTCAGCCAGCCCTCCTCACGCCTGAGGCAGTCAGCCTGCTGCA
GGATTACGATTTCCCGGGCAACGTACGAGAACTTGAGAACATTCTGGAGCGCGCCTACACACTGTGCGACGCAGACCGGA
TCGGACCAGAAGATCTGCATCTCGGTAATGGCGGCCAGCACTCCACGGCACCCAAAGACTCAGCTCCCGATACAGATTCG
ACAGGACCGGAAACCATTACCACGCCGGACGGGGAAATTGATCTGGAAAGCTACCTGGAAAGCATTGAGCGCCAAACCAT
AGAGAAAGCACTAGAAGCCACCCGCTGGAATAAAACTGCCGCTGCCAAGCGGCTGGGAATCAGCTTCCGGGCCCTGCGTT
ATCGGCTGAAAAAGCTCGACATGGAGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

• Bacterial regulatory protein, Fis family (HTH_8) (419-459)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.203	100	0.632
pilR	Acinetobacter baumannii strain A118	52.174	99.567	0.519