Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   AB3239_RS19735 Genome accession   NZ_CP166831
Coordinates   3799988..3800107 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain TE3T-UV25     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3794988..3805107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3239_RS19710 (AB3239_19710) albG 3795152..3795853 (+) 702 WP_321541173.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  AB3239_RS19715 (AB3239_19715) ywhL 3795859..3797235 (-) 1377 WP_014481223.1 YncE family protein -
  AB3239_RS19720 (AB3239_19720) ywhK 3797274..3798629 (-) 1356 WP_015250986.1 YncE family protein -
  AB3239_RS19725 (AB3239_19725) - 3798626..3798856 (-) 231 WP_041334639.1 hypothetical protein -
  AB3239_RS19730 (AB3239_19730) rapF 3798859..3800004 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  AB3239_RS19735 (AB3239_19735) phrF 3799988..3800107 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  AB3239_RS19740 (AB3239_19740) - 3800360..3800839 (+) 480 WP_103804110.1 hypothetical protein -
  AB3239_RS19745 (AB3239_19745) - 3800990..3801778 (+) 789 WP_370957058.1 hypothetical protein -
  AB3239_RS19750 (AB3239_19750) - 3801765..3802439 (+) 675 WP_125121076.1 hypothetical protein -
  AB3239_RS19755 (AB3239_19755) - 3802449..3803246 (+) 798 WP_235701103.1 hypothetical protein -
  AB3239_RS19760 (AB3239_19760) - 3803249..3803896 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  AB3239_RS19765 (AB3239_19765) - 3803889..3804449 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1035567 AB3239_RS19735 WP_009968329.1 3799988..3800107(+) (phrF) [Bacillus subtilis strain TE3T-UV25]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1035567 AB3239_RS19735 WP_009968329.1 3799988..3800107(+) (phrF) [Bacillus subtilis strain TE3T-UV25]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment