Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB3239_RS07935 Genome accession   NZ_CP166831
Coordinates   1501912..1502496 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain TE3T-UV25     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1496912..1507496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3239_RS07905 (AB3239_07905) dapD 1497104..1497814 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB3239_RS07910 (AB3239_07910) dapI 1497884..1499008 (+) 1125 WP_049139865.1 N-acetyldiaminopimelate deacetylase -
  AB3239_RS07915 (AB3239_07915) ykuS 1499070..1499315 (+) 246 WP_003232382.1 YkuS family protein -
  AB3239_RS07920 (AB3239_07920) mscT 1499352..1500155 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  AB3239_RS07925 (AB3239_07925) ahpA 1500387..1500929 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  AB3239_RS07930 (AB3239_07930) ykuV 1501000..1501446 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  AB3239_RS07935 (AB3239_07935) rok 1501912..1502496 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  AB3239_RS07940 (AB3239_07940) cse15 1502537..1503502 (-) 966 WP_370957383.1 spore protein Cse15 -
  AB3239_RS07945 (AB3239_07945) mobA 1503638..1504237 (+) 600 WP_038829588.1 molybdenum cofactor guanylyltransferase -
  AB3239_RS07950 (AB3239_07950) moeB 1504288..1505307 (+) 1020 WP_041335765.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB3239_RS07955 (AB3239_07955) glp 1505325..1506617 (+) 1293 WP_370957384.1 gephyrin-like molybdotransferase Glp -
  AB3239_RS07960 (AB3239_07960) mobB 1506578..1507099 (+) 522 WP_064671333.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=1035522 AB3239_RS07935 WP_014113628.1 1501912..1502496(+) (rok) [Bacillus subtilis strain TE3T-UV25]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=1035522 AB3239_RS07935 WP_014113628.1 1501912..1502496(+) (rok) [Bacillus subtilis strain TE3T-UV25]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment