Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB3239_RS07835 Genome accession   NZ_CP166831
Coordinates   1486066..1486530 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain TE3T-UV25     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1481066..1491530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3239_RS07815 (AB3239_07815) kinA 1481533..1483353 (+) 1821 WP_370957381.1 sporulation histidine kinase KinA -
  AB3239_RS07820 (AB3239_07820) dapX 1483363..1484544 (-) 1182 WP_021479391.1 aminotransferase A -
  AB3239_RS07825 (AB3239_07825) - 1484746..1484907 (-) 162 WP_014476654.1 hypothetical protein -
  AB3239_RS07830 (AB3239_07830) cheV 1485111..1486022 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  AB3239_RS07835 (AB3239_07835) kre 1486066..1486530 (-) 465 WP_003232406.1 YkyB family protein Regulator
  AB3239_RS07840 (AB3239_07840) ykuC 1486656..1487948 (-) 1293 WP_014479656.1 MFS transporter -
  AB3239_RS07845 (AB3239_07845) ltdD 1488024..1488518 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  AB3239_RS07850 (AB3239_07850) ppeE 1488575..1489435 (-) 861 WP_003232400.1 metallophosphoesterase -
  AB3239_RS07855 (AB3239_07855) fadH 1489578..1490342 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1035521 AB3239_RS07835 WP_003232406.1 1486066..1486530(-) (kre) [Bacillus subtilis strain TE3T-UV25]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1035521 AB3239_RS07835 WP_003232406.1 1486066..1486530(-) (kre) [Bacillus subtilis strain TE3T-UV25]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment