Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | AB3239_RS01940 | Genome accession | NZ_CP166831 |
| Coordinates | 361892..362290 (-) | Length | 132 a.a. |
| NCBI ID | WP_302897100.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain TE3T-UV25 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 356892..367290
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3239_RS01905 (AB3239_01905) | - | 357639..357836 (+) | 198 | WP_122060560.1 | hypothetical protein | - |
| AB3239_RS01910 (AB3239_01910) | yckC | 357856..358311 (+) | 456 | WP_076458396.1 | RDD family protein | - |
| AB3239_RS01915 (AB3239_01915) | yckD | 358392..358724 (+) | 333 | WP_032724908.1 | YckD family protein | - |
| AB3239_RS01920 (AB3239_01920) | - | 358851..359273 (+) | 423 | WP_170939093.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| AB3239_RS01925 (AB3239_01925) | - | 359261..359602 (+) | 342 | WP_032724911.1 | DUF3147 family protein | - |
| AB3239_RS01930 (AB3239_01930) | - | 359621..360349 (+) | 729 | WP_370957162.1 | AAA family ATPase | - |
| AB3239_RS01935 (AB3239_01935) | bglC | 360422..361855 (+) | 1434 | WP_370957163.1 | 6-phospho-beta-glucosidase | - |
| AB3239_RS01940 (AB3239_01940) | nin/comJ | 361892..362290 (-) | 399 | WP_302897100.1 | DNA-entry nuclease inhibitor | Regulator |
| AB3239_RS01945 (AB3239_01945) | nucA/comI | 362317..362766 (-) | 450 | WP_302897101.1 | DNA-entry nuclease | Machinery gene |
| AB3239_RS01950 (AB3239_01950) | tlpC | 362934..364655 (-) | 1722 | WP_370957164.1 | methyl-accepting chemotaxis protein TlpC | - |
| AB3239_RS01955 (AB3239_01955) | hxlB | 364765..365322 (-) | 558 | WP_041850679.1 | 6-phospho-3-hexuloisomerase | - |
| AB3239_RS01960 (AB3239_01960) | hxlA | 365328..365960 (-) | 633 | WP_032724921.1 | 3-hexulose-6-phosphate synthase | - |
| AB3239_RS01965 (AB3239_01965) | hxlR | 366193..366555 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14986.99 Da Isoelectric Point: 4.8991
>NTDB_id=1035497 AB3239_RS01940 WP_302897100.1 361892..362290(-) (nin/comJ) [Bacillus subtilis strain TE3T-UV25]
MIKSWKPQELSISYHQFTVFQKDTTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLPFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDTTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLPFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=1035497 AB3239_RS01940 WP_302897100.1 361892..362290(-) (nin/comJ) [Bacillus subtilis strain TE3T-UV25]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATACTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGCCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATACTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGCCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
97.727 |
100 |
0.977 |