Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | PCA50_RS10630 | Genome accession | NZ_CP166770 |
| Coordinates | 2215843..2216223 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AB191 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2210843..2221223
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCA50_RS10600 (PCA50_010600) | tadA | 2210961..2211464 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| PCA50_RS10605 (PCA50_010605) | - | 2211471..2212595 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| PCA50_RS10610 (PCA50_010610) | ung | 2212592..2213305 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| PCA50_RS10615 (PCA50_010615) | - | 2213356..2213952 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| PCA50_RS10620 (PCA50_010620) | gspK | 2214183..2215142 (-) | 960 | WP_243477423.1 | type II secretion system minor pseudopilin GspK | - |
| PCA50_RS10625 (PCA50_010625) | xcpW | 2215142..2215843 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| PCA50_RS10630 (PCA50_010630) | xcpV | 2215843..2216223 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| PCA50_RS10635 (PCA50_010635) | - | 2216213..2216767 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| PCA50_RS10640 (PCA50_010640) | - | 2216777..2217385 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| PCA50_RS10645 (PCA50_010645) | - | 2217423..2218196 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| PCA50_RS10650 (PCA50_010650) | - | 2218214..2218555 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| PCA50_RS10655 (PCA50_010655) | - | 2218567..2219547 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| PCA50_RS10660 (PCA50_010660) | kdsB | 2219559..2220320 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1035266 PCA50_RS10630 WP_000836911.1 2215843..2216223(-) (xcpV) [Acinetobacter baumannii strain AB191]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1035266 PCA50_RS10630 WP_000836911.1 2215843..2216223(-) (xcpV) [Acinetobacter baumannii strain AB191]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |