Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | STAB904_RS00665 | Genome accession | NZ_CP007241 |
| Coordinates | 104203..104487 (+) | Length | 94 a.a. |
| NCBI ID | WP_011284422.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain 1E1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 99203..109487
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STAB904_RS00640 (STAB904_00695) | - | 101149..101514 (+) | 366 | WP_038433847.1 | DUF1033 family protein | - |
| STAB904_RS00645 (STAB904_00700) | comGA | 101607..102545 (+) | 939 | WP_038433848.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| STAB904_RS00650 (STAB904_00705) | comGB | 102481..103515 (+) | 1035 | WP_227868709.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| STAB904_RS00655 (STAB904_00710) | comGC | 103517..103843 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| STAB904_RS00660 (STAB904_00715) | comGD | 103818..104246 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| STAB904_RS00665 (STAB904_00720) | comGE | 104203..104487 (+) | 285 | WP_011284422.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| STAB904_RS00670 (STAB904_00725) | comGF | 104480..104914 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| STAB904_RS00675 (STAB904_00730) | comGG | 104898..105224 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| STAB904_RS00680 (STAB904_00735) | comGH | 105322..106275 (+) | 954 | WP_038433850.1 | class I SAM-dependent methyltransferase | Machinery gene |
| STAB904_RS00685 (STAB904_00740) | - | 106334..107530 (+) | 1197 | WP_010921803.1 | acetate kinase | - |
| STAB904_RS00690 (STAB904_00745) | - | 107717..108025 (+) | 309 | Protein_89 | hypothetical protein | - |
| STAB904_RS00695 (STAB904_00750) | proC | 108108..108878 (-) | 771 | WP_038433852.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10654.59 Da Isoelectric Point: 8.9043
>NTDB_id=103476 STAB904_RS00665 WP_011284422.1 104203..104487(+) (comGE) [Streptococcus pyogenes strain 1E1]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEITLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEITLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=103476 STAB904_RS00665 WP_011284422.1 104203..104487(+) (comGE) [Streptococcus pyogenes strain 1E1]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATAACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATAACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |