Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   STAB1101_RS07120 Genome accession   NZ_CP007240
Coordinates   1449489..1449968 (-) Length   159 a.a.
NCBI ID   WP_229296613.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 7F7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1444489..1454968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAB1101_RS07100 (STAB1101_07100) - 1444658..1445263 (-) 606 WP_002982799.1 response regulator -
  STAB1101_RS07105 (STAB1101_07105) - 1445244..1446806 (-) 1563 WP_020837777.1 ATP-binding protein -
  STAB1101_RS07110 (STAB1101_07110) - 1446846..1448753 (-) 1908 WP_038431585.1 FtsX-like permease family protein -
  STAB1101_RS07115 (STAB1101_07115) - 1448755..1449492 (-) 738 WP_009880388.1 ABC transporter ATP-binding protein -
  STAB1101_RS07120 (STAB1101_07120) rcrQ 1449489..1449968 (-) 480 WP_229296613.1 ABC transporter ATP-binding protein Regulator
  STAB1101_RS07125 (STAB1101_07125) - 1450024..1451649 (-) 1626 WP_038431587.1 DUF4135 domain-containing protein -
  STAB1101_RS07130 (STAB1101_07130) - 1451731..1451886 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  STAB1101_RS07135 (STAB1101_07135) lacG 1452389..1453795 (-) 1407 WP_023605287.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18538.18 Da        Isoelectric Point: 6.6374

>NTDB_id=103451 STAB1101_RS07120 WP_229296613.1 1449489..1449968(-) (rcrQ) [Streptococcus pyogenes strain 7F7]
MFDGDVMYNISLGRESVSGEQVIETCKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVFDEPT
SALDVKTERIIQKNVEALHCTRILVTHRLNTVEKADKILIMDNGKIIDYGNHHYLYKNNKDYCDLYDSYMNKYQEEEVK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=103451 STAB1101_RS07120 WP_229296613.1 1449489..1449968(-) (rcrQ) [Streptococcus pyogenes strain 7F7]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGAAACTTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACACCACTTTTTCGAGATAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTTTAGCAAGAGAACTTGTAACCACCCCTAGAATCTTAGTTTTTGACGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGATTTTGGTTACCCA
CAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGCAAAATTATTGACTATGGAAACCATCATT
ATTTGTACAAAAATAATAAGGATTATTGTGACTTATATGACTCGTATATGAATAAATATCAGGAGGAAGAGGTAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(34-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.342

99.371

0.371
  comA/nlmT Streptococcus mutans UA159

39.597

93.711

0.371
  comA Streptococcus mitis NCTC 12261

38.926

93.711

0.365

Multiple sequence alignment