Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SD311_RS09655 | Genome accession | NZ_CP166245 |
| Coordinates | 2013261..2013680 (-) | Length | 139 a.a. |
| NCBI ID | WP_017722100.1 | Uniprot ID | A0A418INX2 |
| Organism | Staphylococcus sp. KG4-3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2008261..2018680
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SD311_RS09630 (SD311_009635) | thiE | 2008786..2009424 (-) | 639 | WP_107551575.1 | thiamine phosphate synthase | - |
| SD311_RS09635 (SD311_009640) | thiM | 2009427..2010215 (-) | 789 | WP_119603881.1 | hydroxyethylthiazole kinase | - |
| SD311_RS09640 (SD311_009645) | thiD | 2010208..2011029 (-) | 822 | WP_119603882.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SD311_RS09645 (SD311_009650) | tenA | 2011031..2011711 (-) | 681 | WP_017722102.1 | thiaminase II | - |
| SD311_RS09650 (SD311_009655) | - | 2012150..2012839 (-) | 690 | WP_017722101.1 | transglycosylase family protein | - |
| SD311_RS09655 (SD311_009660) | ssb | 2013261..2013680 (-) | 420 | WP_017722100.1 | single-stranded DNA-binding protein | Machinery gene |
| SD311_RS09660 (SD311_009665) | - | 2013871..2014311 (+) | 441 | WP_017722099.1 | YwpF-like family protein | - |
| SD311_RS09665 (SD311_009670) | fabZ | 2014361..2014798 (-) | 438 | WP_017722098.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SD311_RS09670 (SD311_009675) | murA | 2014856..2016121 (-) | 1266 | WP_017722097.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SD311_RS09675 (SD311_009680) | - | 2016229..2016462 (-) | 234 | WP_017722096.1 | DUF1146 family protein | - |
| SD311_RS09680 (SD311_009685) | - | 2016817..2017221 (-) | 405 | WP_017722095.1 | F0F1 ATP synthase subunit epsilon | - |
| SD311_RS09685 (SD311_009690) | atpD | 2017241..2018653 (-) | 1413 | WP_017722094.1 | F0F1 ATP synthase subunit beta | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16137.58 Da Isoelectric Point: 6.4617
>NTDB_id=1033967 SD311_RS09655 WP_017722100.1 2013261..2013680(-) (ssb) [Staphylococcus sp. KG4-3]
MINNIVIVGRLTKDPKIYEKEGNKLATMCVAITRNYRDKDQNTICDYLYCKAVGKIANNIELYLNKGSLVGITGQMQSRK
YEKEGQMHFVSELFIETIKFMSPRNKDEISEFHEIFPIEQVCNSTKEKSLQDNEIYEIV
MINNIVIVGRLTKDPKIYEKEGNKLATMCVAITRNYRDKDQNTICDYLYCKAVGKIANNIELYLNKGSLVGITGQMQSRK
YEKEGQMHFVSELFIETIKFMSPRNKDEISEFHEIFPIEQVCNSTKEKSLQDNEIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=1033967 SD311_RS09655 WP_017722100.1 2013261..2013680(-) (ssb) [Staphylococcus sp. KG4-3]
ATGATTAACAACATTGTCATAGTAGGGAGATTAACCAAAGACCCTAAAATTTATGAGAAGGAGGGGAATAAATTAGCTAC
AATGTGTGTAGCGATAACAAGAAATTATAGAGATAAGGACCAAAATACCATTTGTGATTATCTATATTGTAAGGCAGTTG
GTAAAATAGCTAATAATATCGAACTATATTTAAATAAAGGATCACTTGTGGGAATTACTGGTCAAATGCAATCAAGAAAA
TATGAAAAAGAAGGGCAGATGCATTTTGTATCAGAACTTTTTATCGAAACGATTAAATTTATGTCTCCGAGAAATAAAGA
TGAAATTAGTGAATTTCATGAAATATTCCCTATAGAGCAAGTTTGTAATTCAACTAAAGAAAAAAGTCTACAAGATAATG
AAATATACGAAATTGTATAA
ATGATTAACAACATTGTCATAGTAGGGAGATTAACCAAAGACCCTAAAATTTATGAGAAGGAGGGGAATAAATTAGCTAC
AATGTGTGTAGCGATAACAAGAAATTATAGAGATAAGGACCAAAATACCATTTGTGATTATCTATATTGTAAGGCAGTTG
GTAAAATAGCTAATAATATCGAACTATATTTAAATAAAGGATCACTTGTGGGAATTACTGGTCAAATGCAATCAAGAAAA
TATGAAAAAGAAGGGCAGATGCATTTTGTATCAGAACTTTTTATCGAAACGATTAAATTTATGTCTCCGAGAAATAAAGA
TGAAATTAGTGAATTTCATGAAATATTCCCTATAGAGCAAGTTTGTAATTCAACTAAAGAAAAAAGTCTACAAGATAATG
AAATATACGAAATTGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
65.421 |
76.978 |
0.504 |
| ssb | Staphylococcus aureus MW2 |
64.486 |
76.978 |
0.496 |