Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DXE47_RS13995 Genome accession   NZ_LT992468
Coordinates   2626191..2627477 (+) Length   428 a.a.
NCBI ID   WP_000121122.1    Uniprot ID   Q8NWZ4
Organism   Staphylococcus aureus isolate 12_LA_293     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2621191..2632477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE47_RS13965 - 2621586..2621699 (+) 114 WP_001789890.1 hypothetical protein -
  DXE47_RS13970 tsf 2621734..2622615 (+) 882 WP_000201387.1 translation elongation factor Ts -
  DXE47_RS13975 pyrH 2622752..2623474 (+) 723 WP_000057330.1 UMP kinase -
  DXE47_RS13980 frr 2623493..2624047 (+) 555 WP_001280006.1 ribosome recycling factor -
  DXE47_RS13985 - 2624420..2625190 (+) 771 WP_000473705.1 isoprenyl transferase -
  DXE47_RS13990 - 2625197..2625979 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  DXE47_RS13995 eeP 2626191..2627477 (+) 1287 WP_000121122.1 RIP metalloprotease RseP Regulator
  DXE47_RS14000 - 2627497..2629200 (+) 1704 WP_000814088.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 48135.51 Da        Isoelectric Point: 9.5401

>NTDB_id=1033877 DXE47_RS13995 WP_000121122.1 2626191..2627477(+) (eeP) [Staphylococcus aureus isolate 12_LA_293]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIVYGFESFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=1033877 DXE47_RS13995 WP_000121122.1 2626191..2627477(+) (eeP) [Staphylococcus aureus isolate 12_LA_293]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAACCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCAGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACAACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCGGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACGTA
CGCTCTTCAAACCAATTGTATATGGATTTGAAAGCTTTTTGAAAGGTAGTACACTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCGTTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(191-265)

Peptidase family M50 (Peptidase_M50)

(9-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8NWZ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395