Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   QUE82_RS01995 Genome accession   NZ_AP028059
Coordinates   377444..377842 (-) Length   132 a.a.
NCBI ID   WP_014478800.1    Uniprot ID   A0A0D1L5A4
Organism   Bacillus subtilis subsp. natto strain NARUSE     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 372444..382842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUE82_RS01960 - 373194..373391 (+) 198 WP_121509395.1 hypothetical protein -
  QUE82_RS01965 (BSNN_03540) yckC 373411..373866 (+) 456 WP_014478793.1 RDD family protein -
  QUE82_RS01970 (BSNN_03550) yckD 373948..374280 (+) 333 WP_014478794.1 YckD family protein -
  QUE82_RS01975 (BSNN_03560) - 374408..374830 (+) 423 WP_014478795.1 MarR family transcriptional regulator -
  QUE82_RS01980 (BSNN_03570) - 374818..375138 (+) 321 WP_014478796.1 DUF3147 family protein -
  QUE82_RS01985 (BSNN_03580) - 375157..375901 (+) 745 Protein_347 AAA family ATPase -
  QUE82_RS01990 (BSNN_03600) bglC 375974..377407 (+) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  QUE82_RS01995 (BSNN_03610) nin/comJ 377444..377842 (-) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  QUE82_RS02000 (BSNN_03620) nucA/comI 377869..378318 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  QUE82_RS02005 tlpC 378486..380207 (-) 1722 Protein_351 methyl-accepting chemotaxis protein TlpC -
  QUE82_RS02010 (BSNN_03650) hxlB 380318..380875 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  QUE82_RS02015 (BSNN_03660) hxlA 380881..381513 (-) 633 WP_014478804.1 3-hexulose-6-phosphate synthase -
  QUE82_RS02020 (BSNN_03670) hxlR 381742..382104 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15006.98 Da        Isoelectric Point: 4.8991

>NTDB_id=103366 QUE82_RS01995 WP_014478800.1 377444..377842(-) (nin/comJ) [Bacillus subtilis subsp. natto strain NARUSE]
MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=103366 QUE82_RS01995 WP_014478800.1 377444..377842(-) (nin/comJ) [Bacillus subtilis subsp. natto strain NARUSE]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TATAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAGAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1L5A4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment