Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB8O67_RS06205 Genome accession   NZ_CP166053
Coordinates   1193549..1193740 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus halotolerans strain XYK2-4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1188549..1198740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB8O67_RS06175 (AB8O67_06170) argF 1189395..1190352 (+) 958 Protein_1151 ornithine carbamoyltransferase -
  AB8O67_RS06180 (AB8O67_06175) - 1190438..1190617 (+) 180 WP_003239319.1 YjzC family protein -
  AB8O67_RS06185 (AB8O67_06180) - 1190663..1190848 (-) 186 WP_010333727.1 YjzD family protein -
  AB8O67_RS06190 (AB8O67_06185) - 1191107..1191844 (+) 738 WP_059352722.1 hypothetical protein -
  AB8O67_RS06195 (AB8O67_06190) - 1191927..1192490 (+) 564 WP_326138791.1 hypothetical protein -
  AB8O67_RS06200 (AB8O67_06195) med 1192581..1193534 (+) 954 WP_326138790.1 BMP family ABC transporter substrate-binding protein Regulator
  AB8O67_RS06205 (AB8O67_06200) comZ 1193549..1193740 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  AB8O67_RS06210 (AB8O67_06205) - 1193770..1194000 (-) 231 WP_369888516.1 hypothetical protein -
  AB8O67_RS06215 (AB8O67_06210) fabH 1194166..1195104 (+) 939 WP_268498335.1 beta-ketoacyl-ACP synthase III -
  AB8O67_RS06220 (AB8O67_06215) fabF 1195127..1196365 (+) 1239 WP_326138789.1 beta-ketoacyl-ACP synthase II -
  AB8O67_RS06225 (AB8O67_06220) - 1196446..1197231 (+) 786 WP_326138788.1 DUF2268 domain-containing protein -
  AB8O67_RS06230 (AB8O67_06225) appD 1197422..1198408 (+) 987 WP_044156398.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1033181 AB8O67_RS06205 WP_003224559.1 1193549..1193740(+) (comZ) [Bacillus halotolerans strain XYK2-4]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1033181 AB8O67_RS06205 WP_003224559.1 1193549..1193740(+) (comZ) [Bacillus halotolerans strain XYK2-4]
ATGCAGCACGAAAAATCACTTGAGTTTCTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment