Detailed information NTG1033180

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AB8O67_RS06200
• Genome accession: NZ_CP166053
• Coordinates: 1192581..1193534 (+)
• Length: 317 a.a.
• NCBI ID: WP_326138790.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XYK2-4
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1187581..1198534

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8O67_RS06175 (AB8O67_06170)	argF	1189395..1190352 (+)	958	Protein_1151	ornithine carbamoyltransferase	-
AB8O67_RS06180 (AB8O67_06175)	-	1190438..1190617 (+)	180	WP_003239319.1	YjzC family protein	-
AB8O67_RS06185 (AB8O67_06180)	-	1190663..1190848 (-)	186	WP_010333727.1	YjzD family protein	-
AB8O67_RS06190 (AB8O67_06185)	-	1191107..1191844 (+)	738	WP_059352722.1	hypothetical protein	-
AB8O67_RS06195 (AB8O67_06190)	-	1191927..1192490 (+)	564	WP_326138791.1	hypothetical protein	-
AB8O67_RS06200 (AB8O67_06195)	med	1192581..1193534 (+)	954	WP_326138790.1	BMP family ABC transporter substrate-binding protein	Regulator
AB8O67_RS06205 (AB8O67_06200)	comZ	1193549..1193740 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
AB8O67_RS06210 (AB8O67_06205)	-	1193770..1194000 (-)	231	WP_369888516.1	hypothetical protein	-
AB8O67_RS06215 (AB8O67_06210)	fabH	1194166..1195104 (+)	939	WP_268498335.1	beta-ketoacyl-ACP synthase III	-
AB8O67_RS06220 (AB8O67_06215)	fabF	1195127..1196365 (+)	1239	WP_326138789.1	beta-ketoacyl-ACP synthase II	-
AB8O67_RS06225 (AB8O67_06220)	-	1196446..1197231 (+)	786	WP_326138788.1	DUF2268 domain-containing protein	-
AB8O67_RS06230 (AB8O67_06225)	appD	1197422..1198408 (+)	987	WP_044156398.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35272.91 Da
• Isoelectric Point: 4.8737

>NTDB_id=1033180 AB8O67_RS06200 WP_326138790.1 1192581..1193534(+) (med) [Bacillus halotolerans strain XYK2-4]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSTYNVDVYYKEGVKTDEDIINAIEE
FHKRGVNLLFGHGSEYEEVFNLVSEDYPDMQFVISNAKAKADNVTSVHLSGEAIGFFGGMTAAHMSKTNQVGVIASFSWQ
PEVDGFIKGAKYENPNIEVNTKYTDHWDDDSTAVNLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFDKGTLKGGDHYYDLKSRVVEMGTFSPLVDKAFQKKIAKLVKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1033180 AB8O67_RS06200 WP_326138790.1 1192581..1193534(+) (med) [Bacillus halotolerans strain XYK2-4]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCTACATACAATGTGGACGTCTACTATAAAGAAGGCGTAAAAACAGATGAAGATATTATAAATGCGATTGAAGAA
TTTCATAAGCGCGGCGTCAATCTCCTCTTTGGACATGGAAGTGAGTATGAAGAAGTATTTAACTTGGTGAGTGAAGACTA
TCCGGATATGCAGTTTGTGATTTCAAACGCAAAAGCTAAAGCGGACAATGTCACAAGCGTTCATCTCAGCGGGGAAGCAA
TCGGCTTTTTCGGCGGAATGACCGCTGCCCATATGTCAAAAACCAATCAGGTCGGCGTCATCGCTTCTTTTTCATGGCAG
CCAGAAGTTGACGGCTTTATAAAAGGGGCTAAGTATGAAAATCCTAATATAGAAGTGAATACAAAATATACGGATCACTG
GGATGATGATTCGACTGCGGTGAACCTTTATCAAAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTATATGCGATCGGCTATGTCACAGATCAATCCGATCTT
GGCGAGAACACCGTGTTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATTATAGCTGAGCAATTCGACAAAGG
CACTTTAAAAGGCGGCGATCACTATTACGATCTGAAAAGCCGAGTTGTCGAAATGGGAACCTTCAGTCCGCTTGTAGACA
AAGCCTTTCAGAAAAAAATCGCCAAACTGGTCAAAACATATAACAAAACAGGTGAACTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	92.744	100	0.927