Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   JNUCC21_RS16620 Genome accession   NZ_CP166019
Coordinates   3269358..3271658 (-) Length   766 a.a.
NCBI ID   WP_369878340.1    Uniprot ID   -
Organism   Bacillus sp. JNUCC-21     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3264358..3276658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC21_RS16580 (JNUCC21_16610) - 3264812..3265243 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  JNUCC21_RS16585 (JNUCC21_16615) - 3265243..3265584 (+) 342 WP_043020758.1 Na(+)/H(+) antiporter subunit C -
  JNUCC21_RS16590 (JNUCC21_16620) - 3265577..3267064 (+) 1488 WP_369878339.1 Na+/H+ antiporter subunit D -
  JNUCC21_RS16595 (JNUCC21_16625) - 3267070..3267546 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  JNUCC21_RS16600 (JNUCC21_16630) - 3267546..3267830 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  JNUCC21_RS16605 (JNUCC21_16635) mnhG 3267814..3268188 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  JNUCC21_RS16610 (JNUCC21_16640) - 3268228..3268611 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  JNUCC21_RS16615 (JNUCC21_16645) comA 3268633..3269277 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  JNUCC21_RS16620 (JNUCC21_16650) comP 3269358..3271658 (-) 2301 WP_369878340.1 histidine kinase Regulator
  JNUCC21_RS16625 (JNUCC21_16655) comX 3271672..3271845 (-) 174 WP_012118314.1 competence pheromone ComX -
  JNUCC21_RS16630 (JNUCC21_16660) - 3271814..3272674 (-) 861 WP_157774448.1 polyprenyl synthetase family protein -
  JNUCC21_RS16635 (JNUCC21_16665) degQ 3272882..3273022 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JNUCC21_RS16640 (JNUCC21_16670) - 3273488..3273829 (+) 342 WP_025285192.1 hypothetical protein -
  JNUCC21_RS16645 (JNUCC21_16675) - 3273836..3275059 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  JNUCC21_RS16650 (JNUCC21_16680) - 3275189..3276655 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88374.58 Da        Isoelectric Point: 6.9886

>NTDB_id=1033143 JNUCC21_RS16620 WP_369878340.1 3269358..3271658(-) (comP) [Bacillus sp. JNUCC-21]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITVGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNERYFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGTKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=1033143 JNUCC21_RS16620 WP_369878340.1 3269358..3271658(-) (comP) [Bacillus sp. JNUCC-21]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTATTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATTAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTAAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTACCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATCTAGTA
TCAATATCTCTCCTTTATTTAATAGCTCTATTTTTCATTACTGTAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTTTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGACAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAGCAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAGGTAGAAGGAGACTTAAATGAAAGGTATTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAGATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCACTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTATACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTATGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGCCTG
GTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAACATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATGC
AATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.397

100

0.564


Multiple sequence alignment