Detailed information NTG1033092

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: JNUCC21_RS01985
• Genome accession: NZ_CP166019
• Coordinates: 392424..393572 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus sp. JNUCC-21
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 387424..398572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNUCC21_RS01965 (JNUCC21_01965)	-	387821..388504 (-)	684	WP_033575085.1	ABC transporter ATP-binding protein	-
JNUCC21_RS01970 (JNUCC21_01970)	-	388519..389955 (-)	1437	WP_369878516.1	ABC transporter permease	-
JNUCC21_RS01975 (JNUCC21_01975)	-	390168..390851 (+)	684	WP_007410267.1	response regulator transcription factor	-
JNUCC21_RS01980 (JNUCC21_01980)	-	390838..392271 (+)	1434	WP_161936390.1	HAMP domain-containing sensor histidine kinase	-
JNUCC21_RS01985 (JNUCC21_01985)	rapC	392424..393572 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
JNUCC21_RS01990 (JNUCC21_01990)	phrC	393556..393675 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
JNUCC21_RS01995 (JNUCC21_01995)	-	393823..393933 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
JNUCC21_RS02000 (JNUCC21_02000)	-	394013..395377 (-)	1365	WP_059366589.1	aspartate kinase	-
JNUCC21_RS02005 (JNUCC21_02005)	ceuB	395791..396744 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
JNUCC21_RS02010 (JNUCC21_02010)	-	396734..397681 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
JNUCC21_RS02015 (JNUCC21_02015)	-	397675..398433 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1033092 JNUCC21_RS01985 WP_007410270.1 392424..393572(+) (rapC) [Bacillus sp. JNUCC-21]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1033092 JNUCC21_RS01985 WP_007410270.1 392424..393572(+) (rapC) [Bacillus sp. JNUCC-21]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAGACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568