Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AB8E30_RS07360 Genome accession   NZ_CP165965
Coordinates   1397060..1397854 (+) Length   264 a.a.
NCBI ID   WP_369902677.1    Uniprot ID   -
Organism   Bacillus manliponensis strain jeju3-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1392060..1402854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB8E30_RS07345 (AB8E30_07350) argR 1392806..1393255 (+) 450 WP_369902675.1 arginine repressor ArgR -
  AB8E30_RS07350 (AB8E30_07355) recN 1393529..1395268 (+) 1740 WP_369903482.1 DNA repair protein RecN Machinery gene
  AB8E30_RS07355 (AB8E30_07360) spoIVB 1395452..1396753 (+) 1302 WP_369902676.1 SpoIVB peptidase -
  AB8E30_RS07360 (AB8E30_07365) spo0A 1397060..1397854 (+) 795 WP_369902677.1 sporulation transcription factor Spo0A Regulator
  AB8E30_RS07365 (AB8E30_07370) - 1398163..1398543 (-) 381 WP_369902678.1 DUF1433 domain-containing protein -
  AB8E30_RS07370 (AB8E30_07375) - 1398601..1399785 (+) 1185 Protein_1397 hypothetical protein -
  AB8E30_RS07375 (AB8E30_07380) - 1399787..1400170 (+) 384 WP_369902680.1 hypothetical protein -
  AB8E30_RS07380 (AB8E30_07385) - 1400235..1400369 (-) 135 WP_369902681.1 hypothetical protein -
  AB8E30_RS07385 (AB8E30_07390) - 1400366..1401478 (-) 1113 WP_369902682.1 tetratricopeptide repeat protein -
  AB8E30_RS07390 (AB8E30_07395) - 1401967..1402278 (+) 312 WP_369902683.1 hypothetical protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29459.28 Da        Isoelectric Point: 7.4303

>NTDB_id=1032637 AB8E30_RS07360 WP_369902677.1 1397060..1397854(+) (spo0A) [Bacillus manliponensis strain jeju3-1]
MEKIKVCLVDDNKELIAMLESFVSAQDDMEVIGIGYNGQECLNLLRDKQPDVLVLDIIMPHLDGLAVLEKMRNIERLKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKASTMVKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1032637 AB8E30_RS07360 WP_369902677.1 1397060..1397854(+) (spo0A) [Bacillus manliponensis strain jeju3-1]
GTGGAGAAAATTAAGGTGTGTCTTGTGGATGACAATAAAGAATTGATAGCTATGTTAGAAAGTTTTGTTTCTGCGCAAGA
TGATATGGAAGTAATTGGGATTGGTTATAACGGTCAAGAGTGTTTAAATTTATTAAGAGATAAGCAACCAGATGTACTTG
TATTAGATATTATTATGCCGCACTTAGACGGATTAGCGGTATTAGAGAAAATGCGTAATATTGAACGATTAAAGCAGCCA
AATGTGATTATGCTAACGGCATTTGGTCAAGAAGATGTAACGAAGAAAGCGGTTGACCTTGGAGCATCGTATTTTATTTT
AAAACCTTTTGATATGGAGAATTTAACAAGCCATATTCGTCAGGTGAGTGGTAAAGCGAGTACAATGGTAAAACGTCCAT
TACCATCTTTCCGATCTGCAACAACAGTTGATGGGAAGCCAAAAAATTTAGATGCGAGTATTACAAGTATTATTCATGAA
ATTGGTGTACCTGCGCATATTAAAGGGTATATGTATTTACGTGAAGCGATTTCGATGGTGTATAATGATATTGAGTTACT
TGGCTCAATTACGAAAGTTCTATATCCAGATATCGCTAAAAAGTATAATACAACAGCAAGTCGCGTAGAGCGTGCTATTC
GTCATGCAATTGAAGTTGCATGGAGCCGTGGAAACATCGATTCCATTTCATCTTTATTTGGCTATACTGTTTCCATGTCA
AAAGCGAAGCCAACAAATAGTGAATTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCTTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.15

100

0.811

Multiple sequence alignment