Detailed information NTG1032616

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AB8E30_RS00925
• Genome accession: NZ_CP165965
• Coordinates: 155189..156313 (-)
• Length: 374 a.a.
• NCBI ID: WP_369901573.1
• Uniprot ID: -
• Organism: Bacillus manliponensis strain jeju3-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 150189..161313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8E30_RS00915 (AB8E30_00915)	gyrA	150670..153141 (-)	2472	WP_369901572.1	DNA gyrase subunit A	-
AB8E30_RS00920 (AB8E30_00920)	gyrB	153228..155150 (-)	1923	WP_034643150.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AB8E30_RS00925 (AB8E30_00925)	recF	155189..156313 (-)	1125	WP_369901573.1	DNA replication/repair protein RecF	Machinery gene
AB8E30_RS00930 (AB8E30_00930)	yaaA	156326..156538 (-)	213	WP_034643155.1	S4 domain-containing protein YaaA	-
AB8E30_RS00935 (AB8E30_00935)	dnaN	156661..157806 (-)	1146	WP_369901574.1	DNA polymerase III subunit beta	-
AB8E30_RS00940 (AB8E30_00940)	dnaA	157983..159326 (-)	1344	WP_369901575.1	chromosomal replication initiator protein DnaA	-
AB8E30_RS00945 (AB8E30_00945)	rpmH	159889..160023 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
AB8E30_RS00950 (AB8E30_00950)	rnpA	160101..160466 (+)	366	WP_369901576.1	ribonuclease P protein component	-
AB8E30_RS00955 (AB8E30_00955)	spoIIIJ	160506..161273 (+)	768	WP_369901577.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 43038.29 Da
• Isoelectric Point: 6.5142

>NTDB_id=1032616 AB8E30_RS00925 WP_369901573.1 155189..156313(-) (recF) [Bacillus manliponensis strain jeju3-1]
MYIKELQLQNYRNYEKLALSFEDNVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEYGKIKGRVQKRSNS
ISLELNISKKGKKAKLNELEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNASEEAMLDVFTLQLIEHGVKILQKRFEFLKLLQEWAAPIHRGISRGLEELEIVYKPSLDVSESMDLTKIK
EVYYESFQSVKQREVFRGTTLIGPHRDDLQFFVNGKNVQVFGSQGQQRTTALSLKLAEIELIYSEVNEYPILLLDDVLSE
LDDYRQSHLLGTIQGKVQTFVTTTSVDGIEHDTLKQAKTIHVTNGTVDCEIDGK

Nucleotide

• Length: 1125 bp

>NTDB_id=1032616 AB8E30_RS00925 WP_369901573.1 155189..156313(-) (recF) [Bacillus manliponensis strain jeju3-1]
TTGTATATTAAAGAGTTACAATTACAAAACTATCGCAACTATGAAAAGTTAGCACTTTCTTTTGAAGATAATGTCAATGT
CATTATCGGTGAAAATGCACAAGGTAAAACGAATTTGATGGAAGCGATTTATGTACTCGCAATGGCAAAATCTCATCGGA
CTTCTAATGATCGTGAACTAATACGATGGGACGAAGAATATGGTAAAATAAAAGGGCGAGTACAAAAGAGAAGCAATTCT
ATATCTTTAGAATTAAATATTTCTAAAAAGGGGAAAAAAGCAAAGTTAAATGAACTTGAACAGCAAAAGCTAAGTCAATA
CATTGGCGAAATGAATGTTGTAATGTTTGCTCCTGAAGATTTAAATCTTGTAAAAGGGAGTCCCCAAGTGAGAAGAAGAT
TTTTAGATATGGAACTTGGTCAAATTGCACCAGTTTATCTTTATGAATTAAGTCAATATCAAAAAGTGCTCACGCAGCGA
AATCATTTGTTAAAAAAAATGCAAGGTAATGCAAGTGAAGAAGCAATGTTAGATGTTTTTACTCTTCAACTTATTGAGCA
TGGCGTGAAAATTTTACAAAAGCGCTTTGAATTTTTGAAATTACTCCAAGAATGGGCAGCTCCTATTCATAGAGGAATTA
GCAGAGGGTTAGAAGAGCTTGAAATTGTGTATAAACCAAGCCTAGATGTATCAGAATCCATGGATTTGACGAAAATAAAG
GAAGTATACTATGAAAGTTTCCAATCAGTGAAACAACGTGAAGTTTTCCGTGGTACTACATTAATTGGACCTCATCGTGA
TGATTTACAATTCTTCGTTAATGGTAAAAACGTTCAAGTCTTTGGTTCACAAGGACAACAACGAACGACCGCACTTTCCC
TAAAGTTAGCTGAAATTGAATTGATTTATTCAGAAGTTAACGAATATCCAATCCTTTTATTAGATGATGTGTTATCAGAA
TTAGATGATTATCGTCAGTCTCATCTTCTGGGCACAATCCAAGGAAAAGTGCAAACGTTTGTAACAACGACAAGTGTTGA
TGGGATTGAGCATGATACATTAAAGCAAGCAAAGACAATTCATGTCACGAACGGCACGGTGGATTGTGAAATAGACGGAA
AATAG

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-347)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.848	98.396	0.658