Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | AB8E30_RS00410 | Genome accession | NZ_CP165965 |
| Coordinates | 59209..61644 (-) | Length | 811 a.a. |
| NCBI ID | WP_034642662.1 | Uniprot ID | A0A073JU88 |
| Organism | Bacillus manliponensis strain jeju3-1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 54209..66644
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB8E30_RS00390 (AB8E30_00390) | ispD | 54702..55379 (-) | 678 | WP_369901509.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| AB8E30_RS00395 (AB8E30_00395) | - | 55396..56501 (-) | 1106 | Protein_66 | PIN/TRAM domain-containing protein | - |
| AB8E30_RS00400 (AB8E30_00400) | disA | 56660..57733 (-) | 1074 | WP_369901510.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| AB8E30_RS00405 (AB8E30_00405) | radA | 57737..59113 (-) | 1377 | WP_369901511.1 | DNA repair protein RadA | Machinery gene |
| AB8E30_RS00410 (AB8E30_00410) | clpC | 59209..61644 (-) | 2436 | WP_034642662.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| AB8E30_RS00415 (AB8E30_00415) | - | 61658..62731 (-) | 1074 | WP_369901512.1 | protein arginine kinase | - |
| AB8E30_RS00420 (AB8E30_00420) | - | 62736..63284 (-) | 549 | WP_369901513.1 | UvrB/UvrC motif-containing protein | - |
| AB8E30_RS00425 (AB8E30_00425) | - | 63382..63843 (-) | 462 | WP_034642670.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90571.46 Da Isoelectric Point: 6.3253
>NTDB_id=1032613 AB8E30_RS00410 WP_034642662.1 59209..61644(-) (clpC) [Bacillus manliponensis strain jeju3-1]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTETTQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEAASGHAGGASANAN
TPTLDSLARDLTAVAREERLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESVQILRGLRDRYEAHHRVSITDEAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREKLDDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLENILHNRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGHEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYADMKGKVMDELKKAFRPEFLNRIDEIIVFHTLEKKHI
REIVTLMVDQLIKRLKEQEIELELTEKAIESIADKGFDPEYGARPLRRAIQKHIEDHLSEELLKGAIEKGQKVIFDADGE
TFVIRSTEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTETTQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEAASGHAGGASANAN
TPTLDSLARDLTAVAREERLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESVQILRGLRDRYEAHHRVSITDEAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREKLDDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLENILHNRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGHEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYADMKGKVMDELKKAFRPEFLNRIDEIIVFHTLEKKHI
REIVTLMVDQLIKRLKEQEIELELTEKAIESIADKGFDPEYGARPLRRAIQKHIEDHLSEELLKGAIEKGQKVIFDADGE
TFVIRSTEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=1032613 AB8E30_RS00410 WP_034642662.1 59209..61644(-) (clpC) [Bacillus manliponensis strain jeju3-1]
ATGATGTTTGGAAGATTTACAGAGCGAGCGCAAAAGGTATTAGCTTTATCACAAGAAGAAGCAATTCGCATTGGTCATAA
TAATATAGGAACGGAACATATTTTGCTTGGGCTTGTACGTGAAGGAGAAGGCATTGCCGCGAAAGCATTAATCGCACTTG
GATTAAGCCCTGAAAAAGTACAAAAAGAAGTGGAGGCGTTAATTGGCAGGGGAACAGAAACAACTCAAACTGTTCATTAT
ACGCCTCGCGCCAAAAAAGTAATTGAACTATCTATGGACGAAGCACGGAAGTTAGGTCATTCTTATGTTGGAACAGAGCA
TATTTTACTAGGTCTAATTCGTGAAGGAGAAGGTGTAGCGGCACGTGTATTAAATAATTTAGGTGTAAGTTTAAATAAAG
CACGTCAACAAGTATTACAATTACTTGGAAGTAATGAAGCAGCATCTGGCCACGCTGGAGGTGCTTCTGCAAATGCAAAC
ACACCAACACTTGATAGTCTAGCGCGTGACTTAACAGCTGTTGCTCGTGAAGAGCGTCTTGATCCAGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGCTAAGTAGAAGAACAAAGAACAATCCAGTATTAATTGGAGAACCCGGTGTTG
GTAAAACAGCAATTGCAGAAGGTTTAGCACAGCAAATTGTAAATAATGAAGTTCCAGAAATTTTACGTGATAAGCGTGTT
ATGACTTTAGATATGGGAACTGTTGTTGCAGGGACAAAGTATCGTGGTGAATTTGAAGATCGTCTAAAGAAAGTAATGGA
TGAAATTCGTCAAGCTGGTAATATTATTCTGTTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGTGCAGAAGGCG
CAATCGATGCATCAAATATTTTAAAGCCATCATTAGCACGCGGTGAATTACAGTGTATTGGTGCAACGACATTAGATGAG
TATCGTAAATATATCGAAAAAGATGCAGCTTTAGAAAGACGTTTCCAACCAATTCATGTAGATGAGCCAAGTTTAGAAGA
ATCTGTACAAATTTTAAGAGGGTTGCGCGATCGATATGAGGCTCACCACCGTGTTTCTATTACAGATGAAGCAATTGATG
CAGCTGTGAAGCTTTCTGATCGTTATATTACAGATCGCTTCTTACCAGATAAAGCGATTGATTTAATTGATGAAGCAGCT
TCAAAAGTACGTTTGCGTTCATATACAACACCACCAAACCTAAAAGAACTTGAAGTAAAGTTAGAAGAAGTAAGAAAAGA
AAAAGATGCGGCTGTACAAAGCCAGGAGTTCGAAAAAGCAGCTTCTCTTCGTGATATGGAGCAACGTTTACGTGAAAAGT
TAGATGATACGAAGCGCCAATGGAAAGAGCAGCAAGGAAAAGAGAACTCAGAAGTAACTGTAGAAGACATTGCGAATGTT
GTTTCGACTTGGACTCGTATTCCAGTCTCTAAACTGGCACAGACAGAAACAGACAAGTTACTAAACCTAGAAAATATTTT
ACACAATCGTGTAATTGGGCAAGATGAGGCTGTTGTGGCGGTAGCAAAAGCAGTAAGGCGTGCTCGCGCAGGATTAAAAG
ATCCGAAGCGTCCAATCGGTTCATTTATTTTCTTAGGACCAACAGGTGTTGGTAAAACTGAACTTGCTCGTGCATTGGCA
GAGTCTATGTTTGGGGATGAAGATGCGATGATTCGTGTTGATATGTCTGAGTATATGGAGAAACATTCTACGTCTCGTTT
AGTCGGTTCCCCTCCAGGATATGTTGGACACGAAGAAGGTGGCCAATTGACAGAAAAGGTAAGACGCAAACCATACTCTG
TCGTTTTACTAGATGAGGTTGAGAAAGCTCACCCAGATGTATTTAATATTTTATTACAAGTATTAGAAGATGGCCGTTTA
ACAGACTCTAAAGGCCGTACAGTTGACTTCCGTAACACAATCGTGATTATGACTTCTAACGTTGGTGCGGATGCATTAAA
ACGTAATAAACATCTTGGATTTAACGTGCAGGATGAAAGCCGTGATTATGCAGATATGAAAGGGAAAGTAATGGATGAGC
TGAAAAAAGCGTTCCGTCCAGAATTTTTGAACCGTATCGATGAAATTATTGTCTTCCATACGTTAGAGAAAAAACATATT
CGAGAAATTGTAACACTTATGGTAGATCAGTTAATCAAACGCCTGAAAGAGCAAGAAATTGAGTTAGAGTTAACAGAAAA
AGCGATTGAATCTATTGCAGATAAAGGATTTGATCCAGAATATGGTGCACGTCCGCTTCGCCGAGCAATTCAAAAGCATA
TCGAAGACCATTTGTCAGAAGAATTATTAAAAGGTGCTATTGAGAAAGGTCAAAAAGTGATTTTTGATGCAGATGGAGAA
ACATTTGTCATCCGTAGTACAGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAGCGAGCGCAAAAGGTATTAGCTTTATCACAAGAAGAAGCAATTCGCATTGGTCATAA
TAATATAGGAACGGAACATATTTTGCTTGGGCTTGTACGTGAAGGAGAAGGCATTGCCGCGAAAGCATTAATCGCACTTG
GATTAAGCCCTGAAAAAGTACAAAAAGAAGTGGAGGCGTTAATTGGCAGGGGAACAGAAACAACTCAAACTGTTCATTAT
ACGCCTCGCGCCAAAAAAGTAATTGAACTATCTATGGACGAAGCACGGAAGTTAGGTCATTCTTATGTTGGAACAGAGCA
TATTTTACTAGGTCTAATTCGTGAAGGAGAAGGTGTAGCGGCACGTGTATTAAATAATTTAGGTGTAAGTTTAAATAAAG
CACGTCAACAAGTATTACAATTACTTGGAAGTAATGAAGCAGCATCTGGCCACGCTGGAGGTGCTTCTGCAAATGCAAAC
ACACCAACACTTGATAGTCTAGCGCGTGACTTAACAGCTGTTGCTCGTGAAGAGCGTCTTGATCCAGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGCTAAGTAGAAGAACAAAGAACAATCCAGTATTAATTGGAGAACCCGGTGTTG
GTAAAACAGCAATTGCAGAAGGTTTAGCACAGCAAATTGTAAATAATGAAGTTCCAGAAATTTTACGTGATAAGCGTGTT
ATGACTTTAGATATGGGAACTGTTGTTGCAGGGACAAAGTATCGTGGTGAATTTGAAGATCGTCTAAAGAAAGTAATGGA
TGAAATTCGTCAAGCTGGTAATATTATTCTGTTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGTGCAGAAGGCG
CAATCGATGCATCAAATATTTTAAAGCCATCATTAGCACGCGGTGAATTACAGTGTATTGGTGCAACGACATTAGATGAG
TATCGTAAATATATCGAAAAAGATGCAGCTTTAGAAAGACGTTTCCAACCAATTCATGTAGATGAGCCAAGTTTAGAAGA
ATCTGTACAAATTTTAAGAGGGTTGCGCGATCGATATGAGGCTCACCACCGTGTTTCTATTACAGATGAAGCAATTGATG
CAGCTGTGAAGCTTTCTGATCGTTATATTACAGATCGCTTCTTACCAGATAAAGCGATTGATTTAATTGATGAAGCAGCT
TCAAAAGTACGTTTGCGTTCATATACAACACCACCAAACCTAAAAGAACTTGAAGTAAAGTTAGAAGAAGTAAGAAAAGA
AAAAGATGCGGCTGTACAAAGCCAGGAGTTCGAAAAAGCAGCTTCTCTTCGTGATATGGAGCAACGTTTACGTGAAAAGT
TAGATGATACGAAGCGCCAATGGAAAGAGCAGCAAGGAAAAGAGAACTCAGAAGTAACTGTAGAAGACATTGCGAATGTT
GTTTCGACTTGGACTCGTATTCCAGTCTCTAAACTGGCACAGACAGAAACAGACAAGTTACTAAACCTAGAAAATATTTT
ACACAATCGTGTAATTGGGCAAGATGAGGCTGTTGTGGCGGTAGCAAAAGCAGTAAGGCGTGCTCGCGCAGGATTAAAAG
ATCCGAAGCGTCCAATCGGTTCATTTATTTTCTTAGGACCAACAGGTGTTGGTAAAACTGAACTTGCTCGTGCATTGGCA
GAGTCTATGTTTGGGGATGAAGATGCGATGATTCGTGTTGATATGTCTGAGTATATGGAGAAACATTCTACGTCTCGTTT
AGTCGGTTCCCCTCCAGGATATGTTGGACACGAAGAAGGTGGCCAATTGACAGAAAAGGTAAGACGCAAACCATACTCTG
TCGTTTTACTAGATGAGGTTGAGAAAGCTCACCCAGATGTATTTAATATTTTATTACAAGTATTAGAAGATGGCCGTTTA
ACAGACTCTAAAGGCCGTACAGTTGACTTCCGTAACACAATCGTGATTATGACTTCTAACGTTGGTGCGGATGCATTAAA
ACGTAATAAACATCTTGGATTTAACGTGCAGGATGAAAGCCGTGATTATGCAGATATGAAAGGGAAAGTAATGGATGAGC
TGAAAAAAGCGTTCCGTCCAGAATTTTTGAACCGTATCGATGAAATTATTGTCTTCCATACGTTAGAGAAAAAACATATT
CGAGAAATTGTAACACTTATGGTAGATCAGTTAATCAAACGCCTGAAAGAGCAAGAAATTGAGTTAGAGTTAACAGAAAA
AGCGATTGAATCTATTGCAGATAAAGGATTTGATCCAGAATATGGTGCACGTCCGCTTCGCCGAGCAATTCAAAAGCATA
TCGAAGACCATTTGTCAGAAGAATTATTAAAAGGTGCTATTGAGAAAGGTCAAAAAGTGATTTTTGATGCAGATGGAGAA
ACATTTGTCATCCGTAGTACAGAAAAGGTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.926 |
99.877 |
0.858 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.185 |
100 |
0.502 |
| clpC | Streptococcus thermophilus LMD-9 |
45.735 |
100 |
0.476 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.368 |
100 |
0.471 |
| clpC | Streptococcus mutans UA159 |
45.084 |
100 |
0.464 |
| clpC | Streptococcus pneumoniae D39 |
46.424 |
98.274 |
0.456 |
| clpC | Streptococcus pneumoniae Rx1 |
46.424 |
98.274 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.125 |
98.644 |
0.455 |
| clpE | Streptococcus mutans UA159 |
54.128 |
80.641 |
0.436 |
| clpE | Streptococcus pneumoniae R6 |
52.134 |
80.888 |
0.422 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.134 |
80.888 |
0.422 |
| clpE | Streptococcus pneumoniae Rx1 |
52.134 |
80.888 |
0.422 |
| clpE | Streptococcus pneumoniae D39 |
52.134 |
80.888 |
0.422 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.563 |
84.587 |
0.419 |