Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | PANN_RS02295 | Genome accession | NZ_LT883143 |
| Coordinates | 495857..496222 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 490857..501222
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PANN_RS02265 (PANN_04580) | pyrR | 491479..491991 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| PANN_RS02270 (PANN_04590) | ruvX | 492103..492537 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| PANN_RS02275 (PANN_04600) | - | 492537..493106 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| PANN_RS02280 (PANN_04610) | - | 493155..494048 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| PANN_RS02285 (PANN_04620) | gshB | 494195..495148 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| PANN_RS02290 (PANN_04630) | pilG | 495403..495810 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| PANN_RS02295 (PANN_04640) | pilH | 495857..496222 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| PANN_RS02300 (PANN_04650) | - | 496273..496809 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| PANN_RS02305 (PANN_04660) | pilJ | 496894..498942 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| PANN_RS02310 (PANN_04670) | pilK | 499003..499878 (+) | 876 | WP_023086908.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=1031213 PANN_RS02295 WP_003084587.1 495857..496222(+) (pilH) [Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C)]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=1031213 PANN_RS02295 WP_003084587.1 495857..496222(+) (pilH) [Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C)]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |