Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   AB3D65_RS15015 Genome accession   NZ_CP165606
Coordinates   2975225..2975623 (+) Length   132 a.a.
NCBI ID   WP_014416873.1    Uniprot ID   I2C179
Organism   Bacillus velezensis strain BP1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2970225..2980623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3D65_RS14995 (AB3D65_14995) - 2972625..2972987 (-) 363 WP_007409352.1 winged helix-turn-helix transcriptional regulator -
  AB3D65_RS15000 (AB3D65_15000) hxlA 2973219..2973854 (+) 636 WP_014416875.1 3-hexulose-6-phosphate synthase -
  AB3D65_RS15005 (AB3D65_15005) hxlB 2973851..2974408 (+) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  AB3D65_RS15010 (AB3D65_15010) nucA/comI 2974767..2975204 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AB3D65_RS15015 (AB3D65_15015) nin/comJ 2975225..2975623 (+) 399 WP_014416873.1 competence protein ComJ Regulator
  AB3D65_RS15020 (AB3D65_15020) - 2975664..2977100 (-) 1437 WP_369547143.1 glycoside hydrolase family 1 protein -
  AB3D65_RS15025 (AB3D65_15025) - 2977204..2977482 (-) 279 WP_263612330.1 YckD family protein -
  AB3D65_RS15030 (AB3D65_15030) - 2977599..2978033 (-) 435 WP_014416871.1 RDD family protein -
  AB3D65_RS15035 (AB3D65_15035) - 2978048..2979184 (-) 1137 WP_369547144.1 zinc-dependent alcohol dehydrogenase -
  AB3D65_RS15040 (AB3D65_15040) - 2979249..2980451 (-) 1203 WP_151295783.1 GTP-binding protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=1030823 AB3D65_RS15015 WP_014416873.1 2975225..2975623(+) (nin/comJ) [Bacillus velezensis strain BP1]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1030823 AB3D65_RS15015 WP_014416873.1 2975225..2975623(+) (nin/comJ) [Bacillus velezensis strain BP1]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C179

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765

Multiple sequence alignment