Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB3D65_RS14765 Genome accession   NZ_CP165606
Coordinates   2908728..2909681 (-) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus velezensis strain BP1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2903728..2914681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3D65_RS14745 (AB3D65_14745) - 2904607..2906031 (+) 1425 WP_369547119.1 MDR family MFS transporter -
  AB3D65_RS14750 (AB3D65_14750) - 2906073..2907017 (-) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  AB3D65_RS14755 (AB3D65_14755) - 2907039..2907797 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  AB3D65_RS14760 (AB3D65_14760) - 2907791..2908738 (-) 948 WP_012116803.1 iron chelate uptake ABC transporter family permease subunit -
  AB3D65_RS14765 (AB3D65_14765) ceuB 2908728..2909681 (-) 954 WP_059366593.1 ABC transporter permease Machinery gene
  AB3D65_RS14770 (AB3D65_14770) - 2910095..2911459 (+) 1365 WP_369547120.1 aspartate kinase -
  AB3D65_RS14775 (AB3D65_14775) - 2911539..2911649 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  AB3D65_RS14780 (AB3D65_14780) phrC 2911798..2911917 (-) 120 WP_151295764.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AB3D65_RS14785 (AB3D65_14785) rapC 2911901..2913049 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  AB3D65_RS14790 (AB3D65_14790) - 2913202..2914635 (-) 1434 WP_165913860.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=1030819 AB3D65_RS14765 WP_059366593.1 2908728..2909681(-) (ceuB) [Bacillus velezensis strain BP1]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1030819 AB3D65_RS14765 WP_059366593.1 2908728..2909681(-) (ceuB) [Bacillus velezensis strain BP1]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment