Detailed information NTG1030782

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AB3D65_RS03915
• Genome accession: NZ_CP165606
• Coordinates: 693838..696189 (+)
• Length: 783 a.a.
• NCBI ID: WP_369546414.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BP1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 688838..701189

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3D65_RS03875 (AB3D65_03875)	yhbY	689112..689402 (+)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
AB3D65_RS03880 (AB3D65_03880)	-	689413..689982 (+)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
AB3D65_RS03885 (AB3D65_03885)	yqeK	689972..690532 (+)	561	WP_369546413.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB3D65_RS03890 (AB3D65_03890)	rsfS	690549..690905 (+)	357	WP_007408260.1	ribosome silencing factor	-
AB3D65_RS03895 (AB3D65_03895)	-	690902..691639 (+)	738	WP_015240247.1	class I SAM-dependent DNA methyltransferase	-
AB3D65_RS03900 (AB3D65_03900)	comER	691708..692529 (-)	822	WP_012118027.1	late competence protein ComER	-
AB3D65_RS03905 (AB3D65_03905)	comEA	692588..693202 (+)	615	WP_020956097.1	helix-hairpin-helix domain-containing protein	Machinery gene
AB3D65_RS03910 (AB3D65_03910)	-	693268..693837 (+)	570	WP_003152868.1	ComE operon protein 2	-
AB3D65_RS03915 (AB3D65_03915)	comEC	693838..696189 (+)	2352	WP_369546414.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB3D65_RS03920 (AB3D65_03920)	-	696208..696342 (-)	135	WP_003152870.1	YqzM family protein	-
AB3D65_RS03925 (AB3D65_03925)	-	696383..696534 (+)	152	Protein_705	hypothetical protein	-
AB3D65_RS03930 (AB3D65_03930)	holA	696574..697615 (+)	1042	Protein_706	DNA polymerase III subunit delta	-
AB3D65_RS03935 (AB3D65_03935)	rpsT	697632..697898 (-)	267	WP_003152876.1	30S ribosomal protein S20	-
AB3D65_RS03940 (AB3D65_03940)	gpr	698101..699207 (+)	1107	WP_007408268.1	GPR endopeptidase	-
AB3D65_RS03945 (AB3D65_03945)	spoIIP	699276..700469 (+)	1194	WP_007612673.1	stage II sporulation protein P	-
AB3D65_RS03950 (AB3D65_03950)	-	700486..700821 (+)	336	WP_015240242.1	YqxA family protein	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86690.56 Da
• Isoelectric Point: 8.7941

>NTDB_id=1030782 AB3D65_RS03915 WP_369546414.1 693838..696189(+) (comEC) [Bacillus velezensis strain BP1]
MKYKYLLLPLAAVSATAGIAAAHVFWVLLLFLLYLLFIIVKTKQHAPVIVCLVSFCLYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKMSAVIRTHDKEKWVASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHVTVPGGFDYKEYLYSQQI
HWLFSVTSIEQCEKSKQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGILLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YFLWQAGFQLSFAVSASLILSSSILKKAGESRLAGLAMASLIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPV
SVIGFLLLLLSRQMGECLFGMFDLVMKPVHDFITYAASVDLFTMIVSKPDFLSLLLLAVSVFTLFAALEKGGFLKLRKSA
LFFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGRSKNDSSLVLWTVLSGVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSSTSEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDISGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=1030782 AB3D65_RS03915 WP_369546414.1 693838..696189(+) (comEC) [Bacillus velezensis strain BP1]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGAATTGCCGCCGCTCATGTCTTCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATTGTAAAAACAAAGCAGCATGCTCCGGTTATCGTCTGCCTCGTTT
CTTTTTGTCTTTATTTCTTTCTTTATACGGTTTGTGACGCTGCGAATGTAACGCGGTATCAGGCCGGCAGTTATACTGAA
CAGGCTGTCATCACTAATATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACACATGACAAGGAAAAATG
GGTGGCTTCGTACAAAATCCGGTCTCTTGAGGAAAAGAGACTCATTGAACAGCTTGAACCGGGGATGCGCTGCACGTTTA
CAGGCTCTCTGGAACAGCCTGCACATGTGACGGTTCCCGGAGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTTCCGTGACTTCCATTGAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAACATCAGAAA
AAATTTGATTTCGATCATTCGGAATCACGTGCCCGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGTGCATATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAGGCGGGAATTTTGCTGCTGCT
GTTTTTGCCGGTGTATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCCCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACTTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGGAAAGCAGACTTGCCGGGCTTGCGATGGCTTCATTGATTGCAGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCACTTGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGGTT
TCTGTCATCGGTTTCCTTCTTCTTTTACTCTCAAGGCAGATGGGAGAATGTTTGTTTGGTATGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTCAAAGCCTGACTTTCTTTCCC
TTCTGCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTTGGAAAAGGGAGGTTTTTTAAAACTCAGGAAATCGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGCGCGCCGCACCGCAAAGGGACCGTAATGGTTGATACAGGGGGAGTGATTGCTT
ATCCCGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCATTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCACTGATTTTAACCCATGCGGATCAAGATCACATCGGGGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAGGATCAGAACATATTAAATATGGCGAAAG
AAAATAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGTCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAAGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACGGAAGTGCTGAAAACGTATCCGAATCTGAAGGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCAACGAGTGAAGCCTTTTTGAAGCAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTAAATGTGCTTCGCACCGATAT
CAGCGGAACAATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (25-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	56.736	98.595	0.559