Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   AB3D65_RS01445 Genome accession   NZ_CP165606
Coordinates   228917..229903 (+) Length   328 a.a.
NCBI ID   WP_269195024.1    Uniprot ID   -
Organism   Bacillus velezensis strain BP1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 223917..234903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3D65_RS01415 (AB3D65_01415) - 223950..224348 (+) 399 WP_003152031.1 YueI family protein -
  AB3D65_RS01420 (AB3D65_01420) - 224445..224996 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  AB3D65_RS01425 (AB3D65_01425) - 225014..226480 (+) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  AB3D65_RS01430 (AB3D65_01430) - 226610..227833 (+) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  AB3D65_RS01435 (AB3D65_01435) - 227840..228181 (-) 342 WP_064107455.1 hypothetical protein -
  AB3D65_RS01440 (AB3D65_01440) degQ 228646..228786 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  AB3D65_RS01445 (AB3D65_01445) comQ 228917..229903 (+) 987 WP_269195024.1 class 1 isoprenoid biosynthesis enzyme Regulator
  AB3D65_RS01455 (AB3D65_01455) comP 230056..232359 (+) 2304 WP_369546250.1 histidine kinase Regulator
  AB3D65_RS01460 (AB3D65_01460) - 232440..233085 (+) 646 Protein_238 response regulator transcription factor -
  AB3D65_RS01465 (AB3D65_01465) - 233107..233490 (+) 384 WP_012118312.1 hotdog fold thioesterase -
  AB3D65_RS01470 (AB3D65_01470) mnhG 233530..233904 (-) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  AB3D65_RS01475 (AB3D65_01475) - 233888..234172 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  AB3D65_RS01480 (AB3D65_01480) - 234172..234648 (-) 477 WP_007408672.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37726.29 Da        Isoelectric Point: 5.4671

>NTDB_id=1030770 AB3D65_RS01445 WP_269195024.1 228917..229903(+) (comQ) [Bacillus velezensis strain BP1]
MKTIIEQICLDANQIKNRMKSIIERNIFNEHLMQLLLSFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPKTEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LCIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCETEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1030770 AB3D65_RS01445 WP_269195024.1 228917..229903(+) (comQ) [Bacillus velezensis strain BP1]
GTGAAGACAATTATTGAGCAAATATGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTCAGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAAAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGCGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTTGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGAAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-232)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.938

88.11

0.546


Multiple sequence alignment