Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   AB3D65_RS01440 Genome accession   NZ_CP165606
Coordinates   228646..228786 (+) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain BP1     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 223646..233786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3D65_RS01415 (AB3D65_01415) - 223950..224348 (+) 399 WP_003152031.1 YueI family protein -
  AB3D65_RS01420 (AB3D65_01420) - 224445..224996 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  AB3D65_RS01425 (AB3D65_01425) - 225014..226480 (+) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  AB3D65_RS01430 (AB3D65_01430) - 226610..227833 (+) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  AB3D65_RS01435 (AB3D65_01435) - 227840..228181 (-) 342 WP_064107455.1 hypothetical protein -
  AB3D65_RS01440 (AB3D65_01440) degQ 228646..228786 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  AB3D65_RS01445 (AB3D65_01445) comQ 228917..229903 (+) 987 WP_269195024.1 class 1 isoprenoid biosynthesis enzyme Regulator
  AB3D65_RS01455 (AB3D65_01455) comP 230056..232359 (+) 2304 WP_369546250.1 histidine kinase Regulator
  AB3D65_RS01460 (AB3D65_01460) - 232440..233085 (+) 646 Protein_238 response regulator transcription factor -
  AB3D65_RS01465 (AB3D65_01465) - 233107..233490 (+) 384 WP_012118312.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=1030769 AB3D65_RS01440 WP_003152043.1 228646..228786(+) (degQ) [Bacillus velezensis strain BP1]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1030769 AB3D65_RS01440 WP_003152043.1 228646..228786(+) (degQ) [Bacillus velezensis strain BP1]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891

Multiple sequence alignment