Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   AB6L51_RS15075 Genome accession   NZ_CP163562
Coordinates   2883502..2883642 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus altitudinis strain BC255T1     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2878502..2888642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6L51_RS15050 (AB6L51_15045) - 2878781..2879170 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  AB6L51_RS15055 (AB6L51_15050) comA 2879194..2879835 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  AB6L51_RS15060 (AB6L51_15055) comP 2879916..2882228 (-) 2313 WP_407974480.1 ATP-binding protein Regulator
  AB6L51_RS15065 (AB6L51_15060) comX 2882269..2882439 (-) 171 WP_074041927.1 competence pheromone ComX -
  AB6L51_RS15070 (AB6L51_15065) - 2882436..2883350 (-) 915 WP_060832601.1 polyprenyl synthetase family protein -
  AB6L51_RS15075 (AB6L51_15070) degQ 2883502..2883642 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  AB6L51_RS15080 (AB6L51_15075) - 2884148..2884501 (+) 354 WP_019744042.1 hypothetical protein -
  AB6L51_RS15085 (AB6L51_15080) - 2884538..2885764 (-) 1227 WP_035701209.1 EAL and HDOD domain-containing protein -
  AB6L51_RS15090 (AB6L51_15085) - 2885905..2887374 (-) 1470 WP_007500472.1 nicotinate phosphoribosyltransferase -
  AB6L51_RS15095 (AB6L51_15090) - 2887392..2887943 (-) 552 WP_008345872.1 cysteine hydrolase family protein -
  AB6L51_RS15100 (AB6L51_15095) - 2888004..2888411 (-) 408 WP_007500468.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=1030688 AB6L51_RS15075 WP_003213123.1 2883502..2883642(-) (degQ) [Bacillus altitudinis strain BC255T1]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1030688 AB6L51_RS15075 WP_003213123.1 2883502..2883642(-) (degQ) [Bacillus altitudinis strain BC255T1]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696

Multiple sequence alignment