Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AB6W33_RS10560 Genome accession   NZ_CP163561
Coordinates   2036692..2037951 (-) Length   419 a.a.
NCBI ID   WP_000900647.1    Uniprot ID   A0AAW6XSP1
Organism   Streptococcus agalactiae strain GBS-B4009     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2031692..2042951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6W33_RS10550 (AB6W33_10540) - 2034038..2034622 (-) 585 WP_000842268.1 glycoside hydrolase family 73 protein -
  AB6W33_RS10555 (AB6W33_10545) - 2034747..2036600 (-) 1854 WP_000814045.1 proline--tRNA ligase -
  AB6W33_RS10560 (AB6W33_10550) eeP 2036692..2037951 (-) 1260 WP_000900647.1 RIP metalloprotease RseP Regulator
  AB6W33_RS10565 (AB6W33_10555) - 2037982..2038776 (-) 795 WP_000664686.1 phosphatidate cytidylyltransferase -
  AB6W33_RS10570 (AB6W33_10560) - 2038791..2039543 (-) 753 WP_000469562.1 isoprenyl transferase -
  AB6W33_RS10575 (AB6W33_10565) yajC 2039710..2040051 (-) 342 WP_000056607.1 preprotein translocase subunit YajC -
  AB6W33_RS10580 (AB6W33_10570) - 2040128..2040472 (-) 345 WP_000286792.1 thioredoxin domain-containing protein -
  AB6W33_RS10585 (AB6W33_10575) - 2040663..2041826 (-) 1164 WP_001293702.1 NADP-dependent malic enzyme -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46112.21 Da        Isoelectric Point: 10.0874

>NTDB_id=1030634 AB6W33_RS10560 WP_000900647.1 2036692..2037951(-) (eeP) [Streptococcus agalactiae strain GBS-B4009]
MLGILTFIIIFGVIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIDKEGTTYTIRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNKEGIVTRINLSGKQLDNTSLPINVTAYDLEDKLTITGLVLSETKTYSVDHDATIIEEDGTEIRIAPLDMQY
QNASVWGRLITNFAGPMNNFILGLVVFIALAFIQGGVQDLSTNQVRVSENGPAASAGLKNNDRILQIGSHKVSNWEQLTA
AVEKSTRHLEKKQKLALKIKSKEVVKTINVKPQKVDKSYIIGIMPALKTSFKDKLLGGLKLAWESFFRILNELKKLIAHF
SINKLGGPVALYQASSQAAKNGFVTVLNLMGLISINLGIMNLIPIPALDGGKIVMNILEAIRRKPLKQETETYITLAGVA
VMLVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1030634 AB6W33_RS10560 WP_000900647.1 2036692..2037951(-) (eeP) [Streptococcus agalactiae strain GBS-B4009]
ATGCTAGGAATTTTAACCTTTATTATTATTTTTGGTGTCATTGTAGTTGTTCACGAATTTGGGCATTTCTATTTTGCAAA
GAAATCAGGAATTCTTGTTCGTGAATTTGCTATTGGTATGGGTCCAAAAATCTTTTCTCACATTGATAAAGAAGGAACAA
CCTATACTATTCGTATATTACCGCTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGATGATAAGACTGAAATTAAGACA
GGGACGCCGGCTAGCCTTACTTTAAATAAAGAAGGCATTGTAACTCGTATTAATTTATCAGGAAAACAATTAGACAATAC
TTCTTTACCAATCAATGTAACAGCTTATGATTTAGAAGATAAACTAACTATCACAGGATTGGTCTTAAGTGAGACAAAAA
CCTATAGTGTTGATCACGATGCTACTATCATTGAGGAGGATGGTACTGAAATTCGTATTGCTCCCTTAGATATGCAGTAT
CAGAATGCTTCTGTATGGGGGCGCTTAATTACCAATTTTGCAGGTCCGATGAATAATTTTATTTTAGGTCTTGTAGTCTT
TATTGCACTTGCTTTTATTCAAGGAGGTGTTCAAGACTTATCAACCAATCAGGTCCGTGTATCAGAAAATGGTCCTGCCG
CTAGTGCAGGTTTAAAAAATAATGATCGTATTTTACAAATAGGGTCGCACAAAGTTTCTAACTGGGAACAGTTGACAGCA
GCAGTAGAAAAGTCAACTAGGCATTTAGAAAAAAAACAAAAACTTGCCCTTAAGATTAAGAGCAAAGAGGTGGTGAAAAC
GATCAACGTTAAGCCACAGAAAGTTGATAAATCCTACATCATCGGCATTATGCCAGCTTTAAAGACAAGCTTTAAAGACA
AACTTTTAGGTGGATTAAAACTAGCATGGGAAAGTTTCTTTAGAATTTTAAATGAATTAAAGAAACTTATTGCTCATTTT
AGTATTAATAAATTGGGAGGTCCAGTAGCTCTCTATCAGGCTAGTAGCCAAGCTGCTAAAAATGGTTTCGTCACAGTTCT
CAACTTAATGGGATTAATCTCTATCAACTTAGGTATTATGAATCTCATCCCTATACCAGCCCTTGACGGGGGTAAGATAG
TGATGAATATTTTAGAAGCCATTCGTCGCAAACCACTTAAACAAGAAACAGAAACTTATATTACGCTCGCTGGGGTAGCA
GTTATGTTAGTATTAATGATTGCTGTGACCTGGAACGATATCATGCGAGCTTTCTTCTAA

Domains


Predicted by InterproScan.

(205-271)

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.048

100

0.692

  eeP Streptococcus thermophilus LMD-9

68.81

100

0.69


Multiple sequence alignment