Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AB6K13_RS08120 Genome accession   NZ_CP163546
Coordinates   1732433..1733710 (-) Length   425 a.a.
NCBI ID   WP_369376408.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain NS2301M     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1727433..1738710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6K13_RS08115 (AB6K13_08115) - 1730684..1732393 (-) 1710 WP_003640732.1 proline--tRNA ligase -
  AB6K13_RS08120 (AB6K13_08120) eeP 1732433..1733710 (-) 1278 WP_369376408.1 RIP metalloprotease RseP Regulator
  AB6K13_RS08125 (AB6K13_08125) - 1733748..1734533 (-) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  AB6K13_RS08130 (AB6K13_08130) - 1734549..1735328 (-) 780 WP_369376410.1 isoprenyl transferase -
  AB6K13_RS08135 (AB6K13_08135) frr 1735448..1736011 (-) 564 WP_003640736.1 ribosome recycling factor -
  AB6K13_RS08140 (AB6K13_08140) pyrH 1736013..1736735 (-) 723 WP_003640737.1 UMP kinase -
  AB6K13_RS08145 (AB6K13_08145) tsf 1736935..1737813 (-) 879 WP_003644498.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45920.49 Da        Isoelectric Point: 9.5249

>NTDB_id=1030543 AB6K13_RS08120 WP_369376408.1 1732433..1733710(-) (eeP) [Lactiplantibacillus plantarum strain NS2301M]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMYNFILAIITFAILAFMQGGVTSTTTHVAAMTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1030543 AB6K13_RS08120 WP_369376408.1 1732433..1733710(-) (eeP) [Lactiplantibacillus plantarum strain NS2301M]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGTATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGATGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGTCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAACGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATCTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains


Predicted by InterproScan.

(208-260)

(7-411)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.598

100

0.489

  eeP Streptococcus thermophilus LMD-9

48.598

100

0.489


Multiple sequence alignment